Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3882 ATGTATAGGCCTGTGCCGGTGGCTGCTTCAGCCACGCCCCGAGGTGGATTGCCTACTGACAGTGGTGACTCTGTGGTGACCTTGGATCAAGTTCCGCGATGGAATGATGCTGATCAGTCCTTGGGGTATGAAAATGGAGAATATTCTGCTACATACTTTCCTGATCCTCTGGCATCGCCTTCTGGTGTAGATGGTAGTAGCATCGGTTCTGTTTCAAGATTTCCTGTTGATCATGAAATTAACTCAAAGATATATTTGTGGAGGGGAAATCCATGGAATCTTGAGGTGGATGCTGTTGTTAATTCAACAAATGAGAATATGGATGAAACACACAGCAGCCCTGGATTGCATGCTGCAGCTGGACCTGGCCTTGCAGAAGAATGTGCGACTCTGGGTGGATGCCGAACGGGGATGGCTAAAGTTACCAATGCATATGACCTTCCCGCCAGGAGAATTATCCACACTGTTGGTCCAAAGTATGCTGTGAAGTACCATACTGCTGCTGAGAATGCTTTAAGTCATTGTTATCGTTCTTGCCTGGAGCTTTTAGTTGATAATGGACTCCACAGTATTGCTATGGGTTGTATTTATACAGAGGCAAAAAACTATCCCCGAGAACCAGCTGCGCATGTAGCTATAAGAACTGTTCGGCGGTTTCTTGAGAAGCAGAAAGACAACATAAAAGCTGTTGTCTTTTGCACTACCAGCACAACCGATACAGAGATATATAAACGGTTGCTTCCACTTTACTTTCCACGAGATAAAAACGAGGAGCAGTTTGCATTTTCAAAACTTCCTGCAGATGTTGGAGATGAAAATGGTGAAACCATGATAGATGAGCGTAAAATCAGAATTAAACCTTTGCCTAAAAAGAATGTTTCAAAACCAACTGAAGATCCAGTTGATCTTCCTGTCAGTGATGCTGGCTTGGTTCGCAGGAATTCATCATATTTAGATTCATTTCTGGATCCTGCCTTCATGTCTTTGATTAAAGACCCTGACCAAAGGCGTTTGGAGCAGTGGGAGAAAACTGCTGAAGCACAAAGAGGCTGGAATTGTACCAAATTGCTTGGATATGGTGACCTTGGTGGACCTCCGCTGTCTGCTGCTGAAGAATATTCTCTCCACTCTAGATACCTTTCTAAAGCAAATTCTTTAAATCTTTCTGAAATTGCAGAGATGAAAATTGTTTATCGTGGAGGGGTAGACAGTGAGGGTCGACCCGTCATGGTGGTTGTGGGAGCTCACTTTTTGCTCAGATGTCTTGATCTTGAACGATTTGTGCTTCATGTGGTGAAGGAGTTTGAGCCCATAATACAGAAACCTTATACTATTGTCTACTTCCACTCTGCTGCTTCTTTGCAGATGCAGCCTGATCTAGGTTGGATGAGAAGATTGCAACAAATACTTGGTAGGAAGCACCAGCGCAACCTGCATGCAATATATGTCCTTCATCCAACTTTTGGGCTTAAGGCGGCAGTATTTGCGCTACAGATGTTTGTGGATAATGTGGTTTGGAAGAAAGTAGTATATGTTGATCGACTTCTGCAGCTCTTCAGATATGTACCTCGCGAACAGTTGACCATACCAGATTTTGTGTTCCAGCATGACTTAGAAGTTAATGGAGGGAAAGGTGTTATTGTGGATCCAAGAACAAAATATGTTTACCAAAGACCAACATGA 1683 0.4349 MYRPVPVAASATPRGGLPTDSGDSVVTLDQVPRWNDADQSLGYENGEYSATYFPDPLASPSGVDGSSIGSVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENMDETHSSPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRIIHTVGPKYAVKYHTAAENALSHCYRSCLELLVDNGLHSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDNIKAVVFCTTSTTDTEIYKRLLPLYFPRDKNEEQFAFSKLPADVGDENGETMIDERKIRIKPLPKKNVSKPTEDPVDLPVSDAGLVRRNSSYLDSFLDPAFMSLIKDPDQRRLEQWEKTAEAQRGWNCTKLLGYGDLGGPPLSAAEEYSLHSRYLSKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLHVVKEFEPIIQKPYTIVYFHSAASLQMQPDLGWMRRLQQILGRKHQRNLHAIYVLHPTFGLKAAVFALQMFVDNVVWKKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGVIVDPRTKYVYQRPT* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3882 560 ProSiteProfiles Macro domain profile. 71 251 IPR002589 -
Ahy13g3882 560 MobiDBLite consensus disorder prediction 1 25 - -
Ahy13g3882 560 SUPERFAMILY CRAL/TRIO domain 388 527 IPR036865 -
Ahy13g3882 560 CDD Macro_GDAP2-like 82 250 IPR035793 -
Ahy13g3882 560 SUPERFAMILY Macro domain-like 70 280 IPR043472 -
Ahy13g3882 560 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 1 539 - -
Ahy13g3882 560 Pfam Macro domain 100 212 IPR002589 -
Ahy13g3882 560 Pfam Divergent CRAL/TRIO domain 406 537 IPR001251 -
Ahy13g3882 560 Gene3D Leucine Aminopeptidase, subunit E, domain 1 18 256 IPR043472 -
Ahy13g3882 560 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 1 539 - -
Ahy13g3882 560 SMART YBR022w_8 83 212 IPR002589 -
Ahy13g3882 560 SMART sec14_4 390 536 IPR001251 -
Ahy13g3882 560 CDD SEC14 394 530 IPR001251 -
Ahy13g3882 560 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 384 533 IPR001251 -
Ahy13g3882 560 Gene3D - 389 540 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3882 Ahy-Chr13 138282477 138288624 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3882 13 138282477 138288624 Ahy13g3882 13 138282477 138288624 ECH