Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1836 ATGGAATCGCCGTTCAAGGAAAACATACTGAAAGGGAAGGTAGCTCTTATCACAGGAGGAGCTTCCGGAATCGGCTTCGAGATTTCCACCCAATTCGGCAAACATGGTGCCTCCGTCGCCCTCATGGGTCGCCGCAAACAAGTCCTCGATTCTGCTGTTTCCGTTCTCCAATCACTTGGCATCCCCGCTGTTGGCTTTGCGGGAGATGTGAGGAAGCAGGAGGATGCGGCAAGAGTAGTGGAATCGACTTACAAGCATTTCGGAAAGATTGACATTCTTGTAAATGCAGCAGCTGGAAACTTTCTTGTTGCGGCAGAGGATCTCTCTCCGAATGGATTTCGAACTGTATTGGATATTGATTCTGTTGGAACATTCACAATGTGTCATGAAGCACTAAAATATCTCAAGAAAGGGGGGCAAGGAAGGACCACTTCTGGTGGGGGAACAATATTGAACATTAGTGCTACCTTGCATTATACAGCTTCTTGGTATCAAATTCATGTGTCTGCAGCTAAGGCTGCAGTTGACTCCATTACAAGAAACTTGGCATTAGAATGGGGCACAGACTATGACATTACGGTCAATGGAGTTGCACCTGGACCAATAGGTGACACTCCTGGCATGTTTAAACTGGACCCTGAAGAAATAAATAGCAAAGCCAGAGAATACATGCCTCTGTTTAAAATTGGGGAGAAATGGGATATTGCAATGGCTGCTATCTACCTAGTATCAGATGCAGGAAAATATGTCAACGGCCACACTCTTGTAGCTGATGGAGGACTTTGGCTGAGCCGGCCTCGGCATCTGCCAAAAGAGGCGGTGAAGCAGGTCTCCCGAGCAGTGGAAAAGAGGTCCAGAAATGCACCAGTTGGTGTTCCAAAGAGCAAGCTATGA 894 0.472 MESPFKENILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLDSAVSVLQSLGIPAVGFAGDVRKQEDAARVVESTYKHFGKIDILVNAAAGNFLVAAEDLSPNGFRTVLDIDSVGTFTMCHEALKYLKKGGQGRTTSGGGTILNISATLHYTASWYQIHVSAAKAAVDSITRNLALEWGTDYDITVNGVAPGPIGDTPGMFKLDPEEINSKAREYMPLFKIGEKWDIAMAAIYLVSDAGKYVNGHTLVADGGLWLSRPRHLPKEAVKQVSRAVEKRSRNAPVGVPKSKL* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1836 297 MobiDBLite consensus disorder prediction 275 297 - -
Ahy13g1836 297 Gene3D - 2 287 - -
Ahy13g1836 297 Pfam Enoyl-(Acyl carrier protein) reductase 19 261 - -
Ahy13g1836 297 CDD TER_DECR_SDR_a 10 263 - -
Ahy13g1836 297 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE 1 297 IPR045017 GO:0008670|GO:0009062
Ahy13g1836 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Ahy13g1836 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 IPR002347 -
Ahy13g1836 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Ahy13g1836 297 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Ahy13g1836 297 PRINTS Glucose/ribitol dehydrogenase family signature 190 207 IPR002347 -
Ahy13g1836 297 PRINTS Glucose/ribitol dehydrogenase family signature 88 99 IPR002347 -
Ahy13g1836 297 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Ahy13g1836 297 PRINTS Glucose/ribitol dehydrogenase family signature 14 31 IPR002347 -
Ahy13g1836 297 PRINTS Glucose/ribitol dehydrogenase family signature 225 245 IPR002347 -
Ahy13g1836 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 263 IPR036291 -
Ahy13g1836 297 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE-LIKE 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1836 Ahy-Chr13 30523629 30528761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1836 1 297 Acyl Lipid Metabolism Gene Families AT3G12800 79.866 1.38e-165 460