Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1829 ATGGGAGAAACACAGCACCACCGTCCAACATCGTCAAGACTTGGGATGAGGGCCGTGGCCGGAGGAGGAGGAGGAGGAGGGGGAGAAATTGTGGAGGTCCAAGGAGGCCACATTGTGCGGTCCACCGGCCGGAAGGACCGACACAGCAAGGTCTGCACAGCCAAGGGCCCGAGGGACCGCCGTGTGCGACTCTCCGCACACACCGCCATCCAGTTCTACGACGTTCAGGACCGACTCGGCTACGACCGCCCAAGCAAGGCCGTCGACTGGCTCATCAAGAAAGCAAAGGCCGCCATCGACGAGCTCGCGGAGCTCCCCGCATGGAAACCAACTGCCACTACCACGACCGTCGCCGCCGCCGCCGCCGCGGCCTCGAACTCAAATGTTGCTGTTCAGCAGCAGAAGCTCCGGGAGGAGGAGGAAAACCAACAGCTGAATCAAATCGTCCACCGCCAATCGACCACGGTGGACGACGCTATGGAAGCTTCTGGTAGCCGAAAGGCTACCGCACTGGTTGGTGGCAGTGGAAGAATCTCGGAATTTCAACCGCAACATTTGAACGACGATAACGGTAGTAGTGGCAAATACAACAGTGGCGGTTCTGGTTTCTTTCCGCCGACTTTGGACACTGATATAGCTGATACCATTAAGTCTTTCTTTCCGATGGTGGGGCCGGGGGAGGTTGCAACAACGACGTCGTCCTTTCATAACTATCCTCCACCGCCGGATTTGCTTTCGCGTACAACTAGCGGCGGAAGCAACCACAACCACCACCATCACCATCACCATCACCAACAGCAAGATCTGCGGCTCTCGCTGCAGTCTTTCCAGGACCCATCGATTCTTCTTCAGCACCACCAACAACAGCAGCAGCAGCCGCCACACCAACAGCATGTTCACGAGCAAGTGCTCTTCGCCGGAACCACCGCACTAGCGTTCGACGGCGGTTCTTCCGGATGGTCTGAACAGCAGCACCACCAAGAGGAACAGGAGCATGGACGATTGCAGAGAATGGTGGCTTGGAATAATGCCGCTGCAGATGCTAGTAGCAGTGGCCATGCCAGTGGATTCATCTTCAACTCGTCGGCGACGGCGGCTGTGCCGTCTCCTGCGATGTTTGGCCATGGCCAGTTTTTTCCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCTTCGTTTCGTGCTTGGATAGATCCTTCTTCGATCGCCACGGCTGCCATGACTGTGGATCACCACCACTATCTTTCACCGGCCGCGATCCATCAAGCTTCTATTGGGTTTGCCGGCTCTTCTTCCGGTAGCTTCTCTGGCTTCCGCATACCAGCACGAATTCAGGGTGCGGAGGAGCACGACGGCGTATCTGACAAGCCGTCCTCTGCTTCCTCCGATTCTCGCCATTGA 1401 0.5739 MGETQHHRPTSSRLGMRAVAGGGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWKPTATTTTVAAAAAAASNSNVAVQQQKLREEEENQQLNQIVHRQSTTVDDAMEASGSRKATALVGGSGRISEFQPQHLNDDNGSSGKYNSGGSGFFPPTLDTDIADTIKSFFPMVGPGEVATTTSSFHNYPPPPDLLSRTTSGGSNHNHHHHHHHHQQQDLRLSLQSFQDPSILLQHHQQQQQQPPHQQHVHEQVLFAGTTALAFDGGSSGWSEQQHHQEEQEHGRLQRMVAWNNAAADASSSGHASGFIFNSSATAAVPSPAMFGHGQFFPQRGPLQSSNTPSFRAWIDPSSIATAAMTVDHHHYLSPAAIHQASIGFAGSSSGSFSGFRIPARIQGAEEHDGVSDKPSSASSDSRH* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1829 466 MobiDBLite consensus disorder prediction 39 57 - -
Ahy13g1829 466 MobiDBLite consensus disorder prediction 444 466 - -
Ahy13g1829 466 ProSiteProfiles TCP domain profile. 44 102 IPR017887 -
Ahy13g1829 466 MobiDBLite consensus disorder prediction 231 270 - -
Ahy13g1829 466 MobiDBLite consensus disorder prediction 171 202 - -
Ahy13g1829 466 MobiDBLite consensus disorder prediction 231 252 - -
Ahy13g1829 466 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 466 IPR005333 GO:0003700
Ahy13g1829 466 MobiDBLite consensus disorder prediction 180 202 - -
Ahy13g1829 466 MobiDBLite consensus disorder prediction 443 466 - -
Ahy13g1829 466 Pfam TCP family transcription factor 43 153 IPR017887 -
Ahy13g1829 466 MobiDBLite consensus disorder prediction 1 31 - -
Ahy13g1829 466 PANTHER TRANSCRIPTION FACTOR TCP4 1 466 - -
Ahy13g1829 466 Coils Coil 122 148 - -
Ahy13g1829 466 MobiDBLite consensus disorder prediction 38 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1829 Ahy-Chr13 30175090 30177099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1829 6 466 TCP Transcription Factor Family AT3G15030 45.912 3.44e-100 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy13g1829 TCP 1.10E-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0954 18 12213926 12216744 Ahy13g1829 13 30175090 30177099 ECH
Ahy13g1643 13 24391872 24394464 Ahy13g1829 13 30175090 30177099 ECH
Ahy13g1829 13 30175090 30177099 Ahy13g1829 13 30175090 30177099 ECH
Ahy13g1829 13 30175090 30177099 Ahy18g0954 18 12213926 12216744 PCT
Ahy13g1829 13 30175090 30177099 Ahy8g1702 8 34637311 34640193 PCT