Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1643 ATGGGGATGAGGAGCAATAGTAATAAAGGAGGAGAAATTATTCAAGTTGAAGGGGGCCACATTGTGAGGTCCACAGGGAGAAAAGACCGCCACAGCAAGGTCTACACCGCCAAAGGACCACGCGATAGAAGGGTCAGGCTATCCGCCCACACCGCCATCGAATTCTACGACGTTCAGGACCGTCTCGGCTACGACCGCCCCAGCAAAGCCGTCGATTGGCTCATCAAGAAAGCTCAGCCCTCCATCGACAAGCTAGCCGAGCTTCCTCCCTGGCACCCACCCCTCTCAGCCGCCCCGCCGCACCAGGATCAAGAAGAAGAAGAGGAGGAGGTGGAGGAGAATCATCAACATAATAATGATATTATTCATCAGCAATTCCTTCAGATTCAGCAACAGCAGCAACAAAACCTTGAAACTGACCCCATAGCTTTCTTCCCTACAAGCTCAGCTACTCCCTCTATGAATTTCCAAAACTACCCTCACCAGATGATTTCAAGAACCGCCAACAACAACGTTAACCCCATTACGGAAGATCTTGGACTTTCACTCCACCCGTTTCAACAAGCACCTTCGAATCAACATCAAGGTACTCTCTTTGGTGCTGGATCCAGTAACAACGTCGGATTTGAGAGCCAGTATCAGAAGATTGTAGCTTGGAACAACGAAGCTGCTACCATGGATATCAACAGGGTAGGGTTCATGGTGAACCCGCAGCAGAATCATCATCATCCATTTCTAGGCCAAAGTGTGAGTGGGTCCCTTCAGTCAAGTTTTCCACCACCATCACTTAGATCTTGGGGTGAAATTCAGATGAACCCAAACTCCTCGGAACAACAACACAGCAGGCCACAACAACTGATTCACCATGCTTCCATATTTGGAAGCAGATTTGTTTCTGATGGATTAGCAGCAGGGTTTTGCATTCCAGCTAGAATTCAAGGCGACCAAGAGAACCATCATGGAGTTGCTTCTAACACCACTCCATCTTCTGCTTCTCCTCATTCTCACCACTGA 1014 0.4872 MGMRSNSNKGGEIIQVEGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAQPSIDKLAELPPWHPPLSAAPPHQDQEEEEEEVEENHQHNNDIIHQQFLQIQQQQQQNLETDPIAFFPTSSATPSMNFQNYPHQMISRTANNNVNPITEDLGLSLHPFQQAPSNQHQGTLFGAGSSNNVGFESQYQKIVAWNNEAATMDINRVGFMVNPQQNHHHPFLGQSVSGSLQSSFPPPSLRSWGEIQMNPNSSEQQHSRPQQLIHHASIFGSRFVSDGLAAGFCIPARIQGDQENHHGVASNTTPSSASPHSHH* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1643 337 PANTHER TRANSCRIPTION FACTOR TCP4 8 337 - -
Ahy13g1643 337 MobiDBLite consensus disorder prediction 318 337 - -
Ahy13g1643 337 MobiDBLite consensus disorder prediction 244 285 - -
Ahy13g1643 337 ProSiteProfiles TCP domain profile. 27 85 IPR017887 -
Ahy13g1643 337 MobiDBLite consensus disorder prediction 1 32 - -
Ahy13g1643 337 MobiDBLite consensus disorder prediction 317 337 - -
Ahy13g1643 337 MobiDBLite consensus disorder prediction 85 116 - -
Ahy13g1643 337 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 337 IPR005333 GO:0003700
Ahy13g1643 337 Pfam TCP family transcription factor 26 135 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1643 Ahy-Chr13 24391872 24394464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1643 6 337 TCP Transcription Factor Family AT1G53230 39.257 3.97e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy13g1643 TCP 5.20E-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1643 13 24391872 24394464 Ahy13g1829 13 30175090 30177099 ECH
Ahy13g1643 13 24391872 24394464 Ahy13g1643 13 24391872 24394464 ECH