Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0452 ATGGTTTTCTCTTCTATTCCAGTCTATGTAGATCCTCCCAATTGGCAGCAGCAAGGGAATGTCAATGATAACCCTCACCTACTTCCGCCGCTACCCCCACAGGTTCAGGCAGGACCTGTGGGAGGAGGCGGCGCAATTGCTGGCTCGATCAGACCTGGGTCAATGGCTGATCGAGCCAGGCTAGCAAAGATACCACCTCCAGAGGCTGCCCTCAAGTGTCCTCGTTGCGATTCCACGAACACCAAGTTCTGTTACTTCAACAATTACAGCCTGTCTCAGCCCCGCCACTTCTGCAAGGCCTGTAGGCGCTACTGGACAAAAGGTGGCACTCTGAGGAACGTTCCGGTGGGCGGTGGTTGCCGCCGTAACAAGAAGAACAAGAGGAGTAGTAGCCGGTCGAAATCTCCACCAAACAATAACAATGAAAAGCAACAATCATCGAGTGCAATTCCTTCAAACAACATCCCTCCTCATGAGCTGATTGGTCATCATCAGTTATCTCATCAACCACCACCAAACCTTCCTTTCATGGCTTCTCTCCAGAATCATCTTAGCCGCTATGGTGGGGGAGGAGGAGTTGCTTCAAACATGGGTCTGAGCTTAACGGATCATCATCCTCACATGGGGTTTGTTGGTAATGGAGGAGTAGTGGATCAGTGGCGGCTGCAGCAGTTTCCGTTCTTAAACGGTTTTGATTCGAATTCTTCTTCAGCTGCAGTAGCATCGTCGATATCATACCCTAACACTTTTCATCATGAAAATGATCATCATCAAGGTATTGGTGGTGGTGAAGCAGTAGGTTCTTCAGGCTTGGTTGTTGGTGTTGACATAGCTGGAAATTCTAGGGTTAATAATAATCAGATGCAACCACCAGTGAAAATGGAAGAAAACGGAGCCATGAATTTGTCATCAAGAACAACAACAACCAACTTGAATGTCTCTCATCATCATCAAAATCATCAATACTATTCTTGGAACACTGATATGTCAGCTCTAGCTGCTTCTTCTTCCACTCCTCATAATCTCTTATAA 1032 0.47 MVFSSIPVYVDPPNWQQQGNVNDNPHLLPPLPPQVQAGPVGGGGAIAGSIRPGSMADRARLAKIPPPEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTKGGTLRNVPVGGGCRRNKKNKRSSSRSKSPPNNNNEKQQSSSAIPSNNIPPHELIGHHQLSHQPPPNLPFMASLQNHLSRYGGGGGVASNMGLSLTDHHPHMGFVGNGGVVDQWRLQQFPFLNGFDSNSSSAAVASSISYPNTFHHENDHHQGIGGGEAVGSSGLVVGVDIAGNSRVNNNQMQPPVKMEENGAMNLSSRTTTTNLNVSHHHQNHQYYSWNTDMSALAASSSTPHNLL* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0452 343 MobiDBLite consensus disorder prediction 132 154 - -
Ahy13g0452 343 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 13 336 IPR045174 GO:0003700|GO:0006355
Ahy13g0452 343 ProSiteProfiles Zinc finger Dof-type profile. 71 125 IPR003851 GO:0003677|GO:0006355
Ahy13g0452 343 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 13 336 - -
Ahy13g0452 343 MobiDBLite consensus disorder prediction 112 176 - -
Ahy13g0452 343 ProSitePatterns Zinc finger Dof-type signature. 73 109 IPR003851 GO:0003677|GO:0006355
Ahy13g0452 343 Pfam Dof domain, zinc finger 70 125 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0452 Ahy-Chr13 4646577 4648241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0452 46 262 C2C2-Dof Transcription Factor Family AT3G55370 43.802 3.68e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy13g0452 zf-Dof 5.10E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0452 - - aip:107629110 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0452 13 4646577 4648241 Ahy13g0452 13 4646577 4648241 ECH
Ahy18g0400 18 3413945 3415281 Ahy13g0452 13 4646577 4648241 PCT
Ahy8g1205 8 27422286 27423716 Ahy13g0452 13 4646577 4648241 PCT
Ahy13g0452 13 4646577 4648241 Ahy18g0400 18 3413945 3415281 PCT
Ahy13g0452 13 4646577 4648241 Ahy8g1205 8 27422286 27423716 PCT