Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0360 ATGGAAGGGATAGGTCCCAACAACAATTCATGCACAACAAGGCCTCATAATAATGAAGGTGGTGGTGGAAATAACAACAACAATTTAGAGAAGAAAGCAAGGCCACAAGAGCAATTGAATTGTCCAAGGTGCAATTCAACAAACACAAAGTTTTGCTACTACAACAATTATAGCCTCACACAACCAAGGTATTTTTGCAAGACTTGTAGAAGGTATTGGACTGAAGGTGGGTCCCTCAGGAATGTTCCTGTTGGTGGTGGTTCAAGGAAGAACAAGATCAAGATCAATACCAATAACAACAATAATAATAACAACTCTTCGTCATCGTCGTCAACAACATCAACACCTTCATCAAATTCAAAGGTTCTTGTTCATCAAGACCTACTAAACCCTAATAATAATAGGGTTATTCAAGGACAAGATCTTAATCTTGCTTTTCCATCTATGGATCATCACAACAATTATCATCATGGTTTGTTACCATTTATTGATATGGTTAATAATAATAATAATAGTAGTAGTAATAATAATAATAATAATAGTAATGGTGATGCACCAAGTTCTCTTTCAGCTTTGGAGCTTTTAAGGTCAAGCATGGCTTCTAGGGGTTTGAGTAATCCATATTATGCTTCTTCTAATTCTTCATTGGTACCATCAAATTCATCAAGTGTAATTTACCCTACTTCTGGATTAGGGTTTCCAACCATGCAAGAAGTAGTTAACAATAATAAGCAAAATAGTGGTAACCTTGGATTTTCATCTTCTTCATCAATTATGGATCATCAAGAGAATATTGTTAATAATAGTGATGGTGGAGGAAGAGTTCTTTTCCCTTTTGGAGAGGTGATGAAGAGTGCTGAAGAAAACAACAACAAAGAACAAGGGAATAATTCATCAAGCACTGCCAATGGTGGATATTGGAATGGAATGATGGGTCAAGGGTCATGGTGA 951 0.3596 MEGIGPNNNSCTTRPHNNEGGGGNNNNNLEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKIKINTNNNNNNNNSSSSSSTTSTPSSNSKVLVHQDLLNPNNNRVIQGQDLNLAFPSMDHHNNYHHGLLPFIDMVNNNNNSSSNNNNNNSNGDAPSSLSALELLRSSMASRGLSNPYYASSNSSLVPSNSSSVIYPTSGLGFPTMQEVVNNNKQNSGNLGFSSSSSIMDHQENIVNNSDGGGRVLFPFGEVMKSAEENNNKEQGNNSSSTANGGYWNGMMGQGSW* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0360 316 MobiDBLite consensus disorder prediction 1 40 - -
Ahy12g0360 316 MobiDBLite consensus disorder prediction 288 308 - -
Ahy12g0360 316 Pfam Dof domain, zinc finger 37 92 IPR003851 GO:0003677|GO:0006355
Ahy12g0360 316 MobiDBLite consensus disorder prediction 79 120 - -
Ahy12g0360 316 MobiDBLite consensus disorder prediction 91 120 - -
Ahy12g0360 316 MobiDBLite consensus disorder prediction 289 308 - -
Ahy12g0360 316 PANTHER DOF ZINC FINGER PROTEIN DOF3.7 17 312 - -
Ahy12g0360 316 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Ahy12g0360 316 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 312 IPR045174 GO:0003700|GO:0006355
Ahy12g0360 316 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0360 Ahy-Chr12 5220586 5222990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0360 31 316 C2C2-Dof Transcription Factor Family AT3G61850 44.013 1.02e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy12g0360 zf-Dof 6.90E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0360 - - aip:107623806 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0360 12 5220586 5222990 Ahy17g2557 17 121019387 121020802 ECH
Ahy12g0360 12 5220586 5222990 Ahy12g0360 12 5220586 5222990 ECH
Ahy16g1244 16 23143936 23145979 Ahy12g0360 12 5220586 5222990 PCT
Ahy6g0180 6 2166992 2168564 Ahy12g0360 12 5220586 5222990 PCT
Ahy12g0360 12 5220586 5222990 Ahy16g1244 16 23143936 23145979 PCT
Ahy12g0360 12 5220586 5222990 Ahy6g0180 6 2166992 2168564 PCT