Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2059 ATGCAGGAGATACATTCAATGGGAGGCACCAGGTTCTTCGGCGCCGCTGCTGACAGGAGGCTCAGGCCACACCACCACCACCCTCACCAGAACACCGCCACCAACTGCCACCAGCAGCAAGCACTTAAATGTCCCCGTTGTGATTCACTCAACACCAAGTTCTGTTACTACAACAACTACAACCTCTCCCAGCCACGCCACTTCTGCAAGAACTGCCGCCGCTACTGGACCAAAGGCGGCGTCCTCCGCAACGTCCCTGTCGGTGGCGGTTGCCGCAAGTCCAAGCGTTCCAACGACAACAAGACCGCCAAAACCAGCAAAAATAATAATAGTAATAATAATAGCGCCACCGCAACTTCCTCCGCGGAAACGCCGCCGCAAACGACGTCGTCTCAGGCTCCACCGACGGACCAGAACTCCAATTCTCACTCCAGCAGTGAGAGCTCTAACCTCACCGCGGCGGCGGCGGCGGCGACCATCGGCACGACGGAGCTTAACTCTGATTCTTCCAAGTTGTTGATCCACGAGAATAACAACAACAACGCTTCCTCGAACCCTAATTTGGAGAGCGGTATTTTCTCTGAGATAGGGACGCTGACGAGCTTGATGGTTTCTTCCTCTTCGAACAACGATGCATTGGCGTTTGGATTTGGAGGTGGTGGTGTTGTTCCTGATGCGACGTCGTTTCAGTGGCATCAGCAGCAGAAGTTGCCGGAGAATCTGAACGGTAGTGGTGGGAGCTTGCTGGATCATCATGGACACGGTAGTACTGTAACCGTTGATTTGTCGGCACTTCCGAGCAAGACGGGAAACGGTGGATTTGGACCGTTGGATTGGCAAGCTGGTGTGGATCAAGGTTTGTTTGATCTCCCCAACTCCGTTGATCATGCTTACTGGAGTCAAACTCAATGGCCTGATCACGATAATTCTAATCTCTTTCATCTCCCCTGA 951 0.5321 MQEIHSMGGTRFFGAAADRRLRPHHHHPHQNTATNCHQQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNDNKTAKTSKNNNSNNNSATATSSAETPPQTTSSQAPPTDQNSNSHSSSESSNLTAAAAAATIGTTELNSDSSKLLIHENNNNNASSNPNLESGIFSEIGTLTSLMVSSSSNNDALAFGFGGGGVVPDATSFQWHQQQKLPENLNGSGGSLLDHHGHGSTVTVDLSALPSKTGNGGFGPLDWQAGVDQGLFDLPNSVDHAYWSQTQWPDHDNSNLFHLP* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2059 316 MobiDBLite consensus disorder prediction 86 155 - -
Ahy11g2059 316 PANTHER DOF ZINC FINGER PROTEIN 4 25 303 - -
Ahy11g2059 316 MobiDBLite consensus disorder prediction 103 155 - -
Ahy11g2059 316 Pfam Dof domain, zinc finger 40 96 IPR003851 GO:0003677|GO:0006355
Ahy11g2059 316 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
Ahy11g2059 316 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 25 303 IPR045174 GO:0003700|GO:0006355
Ahy11g2059 316 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2059 Ahy-Chr11 130357356 130358764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2059 18 316 C2C2-Dof Transcription Factor Family AT5G60850 41.118 8.71e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy11g2059 zf-Dof 3.00E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2059 - - adu:107468949 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2059 11 130357356 130358764 Ahy11g2059 11 130357356 130358764 ECH
Ahy11g2059 11 130357356 130358764 Ahy1g2867 1 109368280 109369858 hybridization
Ahy11g2059 11 130357356 130358764 Ahy20g2396 20 128666996 128668500 PCT
Ahy11g2059 11 130357356 130358764 Ahy10g1910 10 104408151 104409704 PCT
Ahy20g2396 20 128666996 128668500 Ahy11g2059 11 130357356 130358764 PCT
Ahy10g1910 10 104408151 104409704 Ahy11g2059 11 130357356 130358764 PCT