Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1915 ATGGAGGACCAAAGTACTGTTACTATTAGGGACCCTGCAATTAAGCTTTTTGGTCAGAAGATTCCCCTTCCCGGAGATCCTGATGTTCTTCCCGCCGCGGCCATGGACCATGAACAGGACCTGCATGAAGAAGACGAAGAAGAGGAGGAGGACCAGGATTACGACGAGGAAGACGGAGAAACCCAAGACACTCACGAGGACAAGGATGCAGAAGCTGAAAATCTTACCACCCAAGAGCAAGAAGCTGATCCTCCTCCAAATGTAGAAGAGAACAAGAAATCAGCCACATCACCTGAGGCTATGGTGAATCCGAAAACACCTGCCATAGAAGAAGATTCTGCAAAATCAAAAAGTGACAAGTCAGATAAGGAACAAGGTGACACATCCAGTCCACAAGATCAGAAACCCCTGAAAAAGCCTGATAAGTTGCTTCCATGCCCCCGCTGCAATAGCATGGATACTAAATTCTGTTACTACAACAACTACAACGTAAACCAGCCACGTTATTTCTGCAAAGCCTGTCAACGATACTGGACTGCAGGTGGCACCATGAGGAATGTGCCGGTTGGAGCAGGGCGGCGAAAAAACAAGAACTCTGCCAACCATTATCGCCACATCACAATCTCTGAGGCTCTTCAAGCAGCTAGAATTGATGCTCCTAACGGGACTCATCTCCCTGCTTTGAAAAGCAATGGGAGAGTCCTCAGTTTCGGAATAGATGCCCCAATCTGCGATTCCATGGCATCTGTCCTTAACCTTGGAGAGAAAAAGGTTCTTAATGGCACAAGAAATGGATTCCATCATGGCTTTGATGATCAAAGATTGAAAGTTCCTTCCAAAAGTGGTGAAAATGGCGAAGCTTGCACGAGTTCATCGCCTGTTGCAGTTTCAAATCCAATGGGGGAAAACAGTAAAAGTACTTTCCAAGAACCAATGCTTCCAAGCAACGGTTACCTTCCTCAAGTTCCTTGTATTGCTAGTGTTCCTTGGCCTTATCCGTGGAATGCGGCAATTCCCTCACCAGCTATGTGTCCTCCAGGATTTCCTGCCCTTCCATTCTATCCTGCGGCTTTTTGGAACTGCAGCATGCCAGGGAACTGGAATGTTCCATGGTTTCCTCCACAGTCCTCCCCTTCAAACCCAAAATCTCCAAGTTCCGGACCGAATTCTCCAACTCTGGGGAAGCACTCTAGGGACGGTGACACGGGTAACCAAGATTCTTTGAGCAAAGAAGAGCCACCAAAGCAGAGAAATGGAAGCGTTTTGGTTCCCAAAACGTTGAGAATCGATGACCCAAGTGAAGCTGCAAAGAGTTCTATATGGGCAACTCTAGGGATCAAGAATGAATCCATTAGTGGGGGAGGCATGTTTAAGGCCTTCCAATCAACAAAAGAAGAAAAGAATCAAGTCGAAGCTTCTCCTGTGTTGCGGGCTAACCCTGCAGCTTTGTCAAGATCCCTTAATTTTCACGAGAGCTCGTGA 1482 0.4703 MEDQSTVTIRDPAIKLFGQKIPLPGDPDVLPAAAMDHEQDLHEEDEEEEEDQDYDEEDGETQDTHEDKDAEAENLTTQEQEADPPPNVEENKKSATSPEAMVNPKTPAIEEDSAKSKSDKSDKEQGDTSSPQDQKPLKKPDKLLPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSANHYRHITISEALQAARIDAPNGTHLPALKSNGRVLSFGIDAPICDSMASVLNLGEKKVLNGTRNGFHHGFDDQRLKVPSKSGENGEACTSSSPVAVSNPMGENSKSTFQEPMLPSNGYLPQVPCIASVPWPYPWNAAIPSPAMCPPGFPALPFYPAAFWNCSMPGNWNVPWFPPQSSPSNPKSPSSGPNSPTLGKHSRDGDTGNQDSLSKEEPPKQRNGSVLVPKTLRIDDPSEAAKSSIWATLGIKNESISGGGMFKAFQSTKEEKNQVEASPVLRANPAALSRSLNFHESS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1915 493 MobiDBLite consensus disorder prediction 77 101 - -
Ahy11g1915 493 Pfam Dof domain, zinc finger 142 198 IPR003851 GO:0003677|GO:0006355
Ahy11g1915 493 MobiDBLite consensus disorder prediction 270 299 - -
Ahy11g1915 493 MobiDBLite consensus disorder prediction 399 413 - -
Ahy11g1915 493 PANTHER CYCLIC DOF FACTOR 2 9 492 IPR045174 GO:0003700|GO:0006355
Ahy11g1915 493 MobiDBLite consensus disorder prediction 110 142 - -
Ahy11g1915 493 MobiDBLite consensus disorder prediction 40 64 - -
Ahy11g1915 493 MobiDBLite consensus disorder prediction 283 299 - -
Ahy11g1915 493 MobiDBLite consensus disorder prediction 374 429 - -
Ahy11g1915 493 ProSitePatterns Zinc finger Dof-type signature. 146 182 IPR003851 GO:0003677|GO:0006355
Ahy11g1915 493 ProSiteProfiles Zinc finger Dof-type profile. 144 198 IPR003851 GO:0003677|GO:0006355
Ahy11g1915 493 PANTHER CYCLIC DOF FACTOR 1 9 492 - -
Ahy11g1915 493 MobiDBLite consensus disorder prediction 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1915 Ahy-Chr11 124626618 124630049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1915 10 491 C2C2-Dof Transcription Factor Family AT3G47500 47.094 3.90e-124 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy11g1915 zf-Dof 2.20E-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1915 - - gmx:778113 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1915 11 124626618 124630049 Ahy13g0009 13 121970 124345 ECH
Ahy13g3852 13 137911103 137914821 Ahy11g1915 11 124626618 124630049 ECH
Ahy11g1915 11 124626618 124630049 Ahy11g1915 11 124626618 124630049 ECH
Ahy11g1915 11 124626618 124630049 Ahy1g2955 1 111046383 111049676 hybridization