Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1688 ATGCTCTCCTCCGACTCCGGCGAAAGCCGTCGATCAGCCAAGCCTCACAACACTTCCCTAGCCCCACCGCCGGCCGAGCAAGAGCACCTGCCATGCCCTCCCTGCGACTCTACTAATACCAAGTTCTGCTACTACAACAACTACAAGTTCTCCCAGCCTCGCCACTTCTACAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACTCTCTGTGACATCCCCGTCGGCGGTAGAAGCCGTAAAAATGCCAAGTGCTCTCGCACCGTTCCTTCAGCCTCCACCGCCACAACCTCCTCCTCCGCGGGTGCGGCCGTCACCTCGGTTTCTTCTGTGACCCCGCTCACCATGGTTCCCGTGGCTGGGAACAACCACCCCGGAGCACCCGTGCAGTTCGGTGGGAGCTTCACTTCGTTGCTGAGCAACACACAGCAGGGTCCTGGTGGGTTTCTGGCTCTGGGTGGGTTCGGGCTTGGTCTTGGGCCTGGCCTCGAAGATGTTGGATTTGGGATGGGGATAGGGAGAAGCCGTTGGGCTTTCCCGGGCGTGGTGGCAGACGGAGGCAGCATTGGCGGCGGTGTTGCGGGCTCCAGTGTTGGGCACACGTGGGGTGAGGGGGAGTGGGGTTACGGGAGTGGGGAGACGGGAGTGGGTGAGGGGGTGAGGGAGTGGGTGAGGGGGTGA 681 0.6285 MLSSDSGESRRSAKPHNTSLAPPPAEQEHLPCPPCDSTNTKFCYYNNYKFSQPRHFYKSCRRYWTHGGTLCDIPVGGRSRKNAKCSRTVPSASTATTSSSAGAAVTSVSSVTPLTMVPVAGNNHPGAPVQFGGSFTSLLSNTQQGPGGFLALGGFGLGLGPGLEDVGFGMGIGRSRWAFPGVVADGGSIGGGVAGSSVGHTWGEGEWGYGSGETGVGEGVREWVRG* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1688 226 MobiDBLite consensus disorder prediction 1 16 - -
Ahy11g1688 226 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
Ahy11g1688 226 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 3 215 - -
Ahy11g1688 226 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Ahy11g1688 226 MobiDBLite consensus disorder prediction 1 31 - -
Ahy11g1688 226 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 3 215 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1688 Ahy-Chr11 103361919 103362606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1688 2 213 C2C2-Dof Transcription Factor Family AT5G66940 43.805 1.28e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy11g1688 zf-Dof 3.90E-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1688 - - ahf:112786370 280.796