Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0985 ATGGCTGCAACGATGGCTTTTATGTCCTCCATTATTCTCTTTCATCTCTTAACAATCTCATCAGCCATGGACATGTCCATCACCACCAACCAGCAGCCACAACAACCGAACACGATGAGAACCGACGATGAAGTCATGATCATGTACGAGGAATGGTTGGTGAAGCACCAAAAGGTGTACAATGGGTTGGGAGAGAAAGACAAGAGGTTCCAAGTTTTTAAGGATAACTTGGGTTTCATTGATGAACACAACACACACAAAAACACCACATACAAACTTGGGTTGAATAGGTTCGCTGATTTGACGAATGAAGAGTACAGAGCAATGTATTTGGGGACAAAGAGTGATCCCAACCGCAGGATCATCAAGGCCAAGATCAGCGCCGGCAACCGTTACGCTTATAGCGCACGTGACCGGTTGCCGGTGCACGTGGATTGGAGGTCCAAAGGTGCACTTGCACCCGTCAAGGATCAGGGAAGCTGTGGAAGTTGTTGGGCATTCTCAACAATAGCTGCAGTGGAATCCATAAATAAGATAGTAACAGGGAAGCTTGTGAGTTTGTCAGAACAAGAACTTGTTGACTGTGACAAAGCATTCAACGAAGGCTGCAATGGTGGTCTCATGGACTATGCCTTCCAATTCATCATTGCAAACGGTGGCATAGACACCGAGCAACACTATCCATACAAGGGCATTGATGGCACATGTGATCCAACCAGAAAGAATGCTAAGGTAGTGAGCATCGATGGGTACGAGGATGTTCCGGTGAATGATGAGAAGGCTTTGAAGAAAGCTGTTGCTCATCAGCCTGTCAGCGTTGCTATTGAAGCCTCTGGCAGGGCCTTGCAACTCTACGACTCAGGTGTGTTTACGGGTAGATGTGGAACAAGTTTAGATCATGGTGTGGTTGTAGTTGGATATGGAACCGAAAATGGTGTAGACTATTGGCTTGTGAGGAATTCATGGGGCAAGAATTGGGGCGAGGATGGCTACTTCAAGTTGCAGCGTAACGTGAGAGGCACCAATACTGGCAAATGTGGAATCGCCATGGAAGCCTCGTACCCGGTGAAGAATGGCGCAAACGCCGCAATCCAGAACCCGGCTTCCCAGAGAACTGGAGGGAGTGTTAGCAGCGCTTGA 1140 0.4789 MAATMAFMSSIILFHLLTISSAMDMSITTNQQPQQPNTMRTDDEVMIMYEEWLVKHQKVYNGLGEKDKRFQVFKDNLGFIDEHNTHKNTTYKLGLNRFADLTNEEYRAMYLGTKSDPNRRIIKAKISAGNRYAYSARDRLPVHVDWRSKGALAPVKDQGSCGSCWAFSTIAAVESINKIVTGKLVSLSEQELVDCDKAFNEGCNGGLMDYAFQFIIANGGIDTEQHYPYKGIDGTCDPTRKNAKVVSIDGYEDVPVNDEKALKKAVAHQPVSVAIEASGRALQLYDSGVFTGRCGTSLDHGVVVVGYGTENGVDYWLVRNSWGKNWGEDGYFKLQRNVRGTNTGKCGIAMEASYPVKNGANAAIQNPASQRTGGSVSSA* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0985 379 CDD Peptidase_C1A 141 355 IPR039417 -
Ahy11g0985 379 Pfam Papain family cysteine protease 140 356 IPR000668 GO:0006508|GO:0008234
Ahy11g0985 379 SMART Inhibitor_I29_2 49 106 IPR013201 -
Ahy11g0985 379 Pfam Cathepsin propeptide inhibitor domain (I29) 49 106 IPR013201 -
Ahy11g0985 379 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 30 364 - -
Ahy11g0985 379 PRINTS Papain cysteine protease (C1) family signature 300 310 IPR000668 GO:0006508|GO:0008234
Ahy11g0985 379 PRINTS Papain cysteine protease (C1) family signature 315 321 IPR000668 GO:0006508|GO:0008234
Ahy11g0985 379 PRINTS Papain cysteine protease (C1) family signature 158 173 IPR000668 GO:0006508|GO:0008234
Ahy11g0985 379 SMART pept_c1 140 356 IPR000668 GO:0006508|GO:0008234
Ahy11g0985 379 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 315 334 IPR025661 -
Ahy11g0985 379 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 158 169 IPR000169 -
Ahy11g0985 379 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 298 308 IPR025660 -
Ahy11g0985 379 PANTHER CYSTEINE PROTEASE 30 364 - -
Ahy11g0985 379 SUPERFAMILY Cysteine proteinases 41 356 IPR038765 -
Ahy11g0985 379 Gene3D Cysteine proteinases 18 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0985 Ahy-Chr11 21507498 21511298 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3277 19 155870831 155873326 Ahy11g0985 11 21507498 21511298 ECH
Ahy16g3497 16 152390159 152394384 Ahy11g0985 11 21507498 21511298 ECH
Ahy11g0985 11 21507498 21511298 Ahy11g0985 11 21507498 21511298 ECH
Ahy11g0985 11 21507498 21511298 Ahy1g0988 1 16874803 16878318 hybridization