Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0262 ATGCCCTCCTCCGACTCCGGCGAAAGCCGTCGATCAGCCAAGCCTCACAACACTTCCCTAGCCCCACCGCCGGCCGAGCAAGAGCACCTGCTATGCCCTCCCTGCGACTCTACTAATACCAAGTTCTGCAACTACAACAACTACAAGTTCTCCCAGCCTCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACTCTCCGTGACATCCCCGTCGGTGGTGGAAGCCGTAAAAACGCCAAGTGCTCTCGCATCGTTCCTTCAGCCTCCACCGCCACAACCTCCTCCTCCGTGGGTGCGGCCGTCACCTCGGTTTCTTCTGTGACCCCGCTCACCATGGTTCCCGTGGCCGGGAACAACCACCCCGGAGCACCCGTGCAGTTCGGTGGGAGCTTCACTTCGTTGCTGAGCAACACACAGCAGGGTCCTGGTAGGTTTCTGGCTCTGGGTGGGTTCGGGCTTGGTCTTGGGCCTGGCCTCGAAGATGTTGGATTTGGGATGGGGATGGGGAGAGGCCGTTGGGCTTTCCCGGGCGTGGTGGCGGACGGAGGCAGCATTGGCGGCGGTGTTGCGGGCTCCGGTGTTGGGCACACGTGGGGTGAGGGGGAGTGGGGTTACAGGAGTGGGGTGACGGGAGTGGGGTGA 654 0.6315 MPSSDSGESRRSAKPHNTSLAPPPAEQEHLLCPPCDSTNTKFCNYNNYKFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKCSRIVPSASTATTSSSVGAAVTSVSSVTPLTMVPVAGNNHPGAPVQFGGSFTSLLSNTQQGPGRFLALGGFGLGLGPGLEDVGFGMGMGRGRWAFPGVVADGGSIGGGVAGSGVGHTWGEGEWGYRSGVTGVG* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0262 217 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 205 - -
Ahy11g0262 217 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Ahy11g0262 217 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Ahy11g0262 217 MobiDBLite consensus disorder prediction 1 16 - -
Ahy11g0262 217 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 205 IPR045174 GO:0003700|GO:0006355
Ahy11g0262 217 MobiDBLite consensus disorder prediction 1 27 - -
Ahy11g0262 217 Pfam Dof domain, zinc finger 29 84 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0262 Ahy-Chr11 2856329 2857017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0262 1 194 C2C2-Dof Transcription Factor Family AT5G66940 46.341 5.16e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy11g0262 zf-Dof 1.60E-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0262 - - ahf:112786370 328.561