Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2604 ATGGCTGTACGGCAGGGAAATTCTGAAGGGTCAACAGGAGCTTGCCTTTTTGATCTCTTCTGCTCTGAAACACCAAGTTTGAATTCCCAAAGTCAAAGAAGCCAATGGCTACCTCATGTAACTCCACAAGAAAGGCTCGACAATCTGATGCGTCAAGCGGGGAACAGGTTCTGTGCCGATTGCGGATCATCAGATCCAAAATGGGCGTCTTCAAGTCTTGGAGTATTTATTTGCATCCAATGTTCTGGCATACATAGAAGCCTAGGAGTCCATATATCGAAGGTTCTATCGCTGAAACTAGATGACTGGACAGACGAACAAGTTGATGAATTGGTGAAATTGGGTGGAAATACAGTAATCAATAAGAGGTATGAAGCTTGTGTCCCAAATAACATTAAAAAACCAAAACCGCATTCTTCCATCGAAGAGCGTGCAGATTATATCAGAAGAAAATACGAACTTCTACAGTTTTTGGATACGGAGAAAAATTTGCAATGCTCCTTTCCACCATCTCCACAAAGATATTTAACATGCTCCCCAAGCAACGCTGCTTCCTGTGGGTTTCAAATGGACAAAAGACATTACGAAAAGCAAACAACTAAAGCTCGTATTGGGACTGCACTCCGACACAGCTGGGGAAGAAAGGAATCCGAGCATAAGATTTCAAAGAAGAGTACTTCGTTGGCAGGTATGGTTCAATTTGTTGGGTTGATCAAGGTTAATGTCGTTAAAGGAACTAACCTGGCTGTCCGGGATGTTGTGACTAGCGACCCTTATGTCATGCTTTCTCTTGGTCACCAATCGGTGAAGACTCGTGTCATAAAGAACAACTTGAATCCAGTTTGGAATGAAAGCTTAATGCTCTCGATTCCAGAGCACGTTCCTCCTCTTAAAGTGGTTGTGTATGACAAGGATACTTTCTCGACCGATGATTTTATGGGCGAGGCTGAAATAGACATTCAACCTCTAGTAACTGCTGCAAAGGCATACGAGAAATCTTCGATCAACGAGTCAATGCAGCTCGGAAAATGGGTAGCAAGCGGCGAAAACACTCTTGTTAAAGATGGTATCATCACCCTAGAAGAAGGGAAGGTCAAACAAGAGATACAGTTGAGGTTACAGAAGGTTGAGCGAGGAGTTTTAGACATTGAGCTTGAATGTCTTCCTCTTACTCAATAG 1179 0.4292 MAVRQGNSEGSTGACLFDLFCSETPSLNSQSQRSQWLPHVTPQERLDNLMRQAGNRFCADCGSSDPKWASSSLGVFICIQCSGIHRSLGVHISKVLSLKLDDWTDEQVDELVKLGGNTVINKRYEACVPNNIKKPKPHSSIEERADYIRRKYELLQFLDTEKNLQCSFPPSPQRYLTCSPSNAASCGFQMDKRHYEKQTTKARIGTALRHSWGRKESEHKISKKSTSLAGMVQFVGLIKVNVVKGTNLAVRDVVTSDPYVMLSLGHQSVKTRVIKNNLNPVWNESLMLSIPEHVPPLKVVVYDKDTFSTDDFMGEAEIDIQPLVTAAKAYEKSSINESMQLGKWVASGENTLVKDGIITLEEGKVKQEIQLRLQKVERGVLDIELECLPLTQ* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2604 392 ProSiteProfiles ARF GTPase-activating proteins domain profile. 43 165 IPR001164 GO:0005096
Ahy10g2604 392 ProSiteProfiles C2 domain profile. 215 334 IPR000008 -
Ahy10g2604 392 SUPERFAMILY ArfGap/RecO-like zinc finger 43 158 IPR037278 -
Ahy10g2604 392 SMART C2_3c 237 332 IPR000008 -
Ahy10g2604 392 PRINTS HIV Rev interacting protein signature 74 91 IPR001164 GO:0005096
Ahy10g2604 392 PRINTS HIV Rev interacting protein signature 55 74 IPR001164 GO:0005096
Ahy10g2604 392 PRINTS HIV Rev interacting protein signature 95 116 IPR001164 GO:0005096
Ahy10g2604 392 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 10 392 - -
Ahy10g2604 392 Pfam C2 domain 237 326 IPR000008 -
Ahy10g2604 392 Gene3D Arf GTPase activating protein 26 166 IPR038508 -
Ahy10g2604 392 CDD ArfGap 46 152 - -
Ahy10g2604 392 Pfam Putative GTPase activating protein for Arf 44 158 IPR001164 GO:0005096
Ahy10g2604 392 Gene3D C2 domain 234 383 IPR035892 -
Ahy10g2604 392 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 10 392 IPR044518 GO:0005096|GO:0005543
Ahy10g2604 392 CDD C2_ArfGAP 235 379 - -
Ahy10g2604 392 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 232 327 IPR035892 -
Ahy10g2604 392 SMART arf_gap_3 44 165 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2604 Ahy-Chr10 115555364 115559707 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3165 20 142329979 142334431 Ahy10g2604 10 115555364 115559707 hybridization