Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2601 ATGATGTACAACGACCCTCGTCACCACCACCATCAGCAGCCTCAGCCTCAGCCTCAACAACCGCCGCATTTCCACCACCAACAGCCTCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCCAGGTCCTGATTTCCACCATGGACCGCCGCCTCCTCCGCAGATGATGCGTCAGCCTTCTGCTGGTTCCTCCACTGAATTTCACCACCCCGCTCCCGGAGGCCCTCCTCCTCACTACGACGGTCATGGCGATAGTCACGGTGCAAAAAGGATAAGAAAGCTTACTCAACGGAAAGCAGTTGATTACACAAGCACCGTCGTGCGGTATATGCAGGTTCGAATGTGGCAGAGGGATTCGAGGGATAGGACGGTATTGCAACCTACCCCGGCCGCAGCAATTGATATGTTGCCAGCTGCTGGGTACCCGGACAATCCATCTACCAGCTTTGCTGCCAAGTTTGTTCATACCTCTTTAAATAAAAATCGATGTCCAATTAACAGGGTTGTGTGGACTCCAACGGGTCGGCGTCTTATCACAGGTTCTCAGACTGGTGAATTTACCCTCTGGAATGGACAGTCTTTTAATTTTGAAATGATTCTTCAGGCTCACGACCAAGCAATTAGATCCATGGTTTGGAGTCACAATGACAACTGGATGGTCTCGGGTGATGATGGCGGTGCAATAAAATATTGGCAGAACAACATGAATAATGTCAAAGCCAACAAATCTGCCCATAAGGAATCAGTCCGTGACTTAAGTTTCTGTAGAACAGATTTAAAGTTCTGTTCGTGCTCTGATGATACCACAGTTAAAGTATGGGATTTTGCAAGATGTCAAGAAGAGCGTTCTTTAACTGGCCATGGTTGGGATGTTAAGAGTGTTGACTGGCATCCTACAAAGTCTCTATTAGTATCAGGTGGCAAGGACCAGCTTGTAAAACTCTGGGATGCTAAAACAGGAAGAGAGCTTTGCTCATTTCACGGCCATAAAAGTACTGTACTCTGTGTCAAATGGAATCAAAATGGCAACTGGGTGCTGACAGCCTCAAAAGATCAAATAATAAAGCTTTATGACATAAGGGCTATGAAGGAGCTTGAATCTTTCCGTGGACATCGGAAGGATGTAACTGCTTTGGCGTGGCATCCGTTCCATGAAGAGTACTTTGTCAGTGGAAGTTACGATGGTGCAATATTCCATTGGCTTGTTGGGCATGATACACCGCAAATTGAAATTCCAAATGCTCATGATAATAATGTGTGGGACCTTGCATGGCATCCTATCGGATATCTACTCTGCAGCGGTAGCAGTGATCACACAACAAAGTTTTGGTGTCGGAATAGGCCAGGAGACACTGGTCGTGATAGATTTAACATGGGATATGCTGAGCAAACTCCTGTAGCTGGTCGAGTTGGTGGTAACTTTCCTGTACCCGAGGGTCCAACGACGCCAGGACCATTTGCCCCTGGGTTGACTCGAAATGAGGGTACAATTCCAGGTGTTGGAGTTGCGATGCCCCTGGCCATTCCTTCGCTTGATACACCTCAGGGAGATCAGCAATCTCATCCAGTATCAATGGGTGCCCCTCCTCTTCCCCCAGGTCCACATCCTTCTCTTCTTGCGGCCAATCAACAGCAACCGTACCAGCAGAATCCTCAGCAGATGCCACAACATCAACACCAGGGAATGCCACATCAGATGGGTCCAATGCCTATGCATCCAAATATGCCACAGCTACAACATCCTTCCCATTCACCCATGCTCCCTCATCCACATATGCCTCGCCCCCCAACACAAATGCCCCCTCTTGGAATGGCCGGATCCATGCCAATGATTTCTTCGGTGCCTCCATCTCATCCAAAACCAATGTCAGGTCCTATGGGGATGCAAGGTGCAATGAATCAGATGGGGCCTCCTATGCCACAAGGTCCCTATGTTGGCATGAATCAAATGCATTCAGGATCCATGCCCAATAGTGGAGGGCCTCCTATTGGAGGCTTTCCAGGCAACATGCCTAACATGCAGGCACCATCAAATGCCGGTTATGGTCAAGGTGGTTCATTCAACCGACCTCAAGGTGGACAAATGCCAATGATGCAAGGGTATAATCCTTACCAGTCTGGAAATCAATCTGGGCTTCCTCCAAACGCACAACCTGGTCCTGGCTCACACTCTCAAATGCCTCAATAG 2184 0.4908 MMYNDPRHHHHQQPQPQPQQPPHFHHQQPPPPPPQQQQQPGPDFHHGPPPPPQMMRQPSAGSSTEFHHPAPGGPPPHYDGHGDSHGAKRIRKLTQRKAVDYTSTVVRYMQVRMWQRDSRDRTVLQPTPAAAIDMLPAAGYPDNPSTSFAAKFVHTSLNKNRCPINRVVWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDAKTGRELCSFHGHKSTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSYDGAIFHWLVGHDTPQIEIPNAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDTGRDRFNMGYAEQTPVAGRVGGNFPVPEGPTTPGPFAPGLTRNEGTIPGVGVAMPLAIPSLDTPQGDQQSHPVSMGAPPLPPGPHPSLLAANQQQPYQQNPQQMPQHQHQGMPHQMGPMPMHPNMPQLQHPSHSPMLPHPHMPRPPTQMPPLGMAGSMPMISSVPPSHPKPMSGPMGMQGAMNQMGPPMPQGPYVGMNQMHSGSMPNSGGPPIGGFPGNMPNMQAPSNAGYGQGGSFNRPQGGQMPMMQGYNPYQSGNQSGLPPNAQPGPGSHSQMPQ* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2601 727 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 325 359 - -
Ahy10g2601 727 CDD WD40 161 442 - -
Ahy10g2601 727 MobiDBLite consensus disorder prediction 1 87 - -
Ahy10g2601 727 Gene3D - 109 314 IPR015943 GO:0005515
Ahy10g2601 727 Pfam WD domain, G-beta repeat 363 399 IPR001680 GO:0005515
Ahy10g2601 727 Pfam WD domain, G-beta repeat 197 230 IPR001680 GO:0005515
Ahy10g2601 727 Pfam WD domain, G-beta repeat 242 273 IPR001680 GO:0005515
Ahy10g2601 727 Pfam WD domain, G-beta repeat 320 357 IPR001680 GO:0005515
Ahy10g2601 727 Pfam WD domain, G-beta repeat 411 442 IPR001680 GO:0005515
Ahy10g2601 727 Pfam WD domain, G-beta repeat 278 315 IPR001680 GO:0005515
Ahy10g2601 727 ProSiteProfiles Trp-Asp (WD) repeats profile. 283 324 IPR001680 GO:0005515
Ahy10g2601 727 SUPERFAMILY WD40 repeat-like 153 442 IPR036322 GO:0005515
Ahy10g2601 727 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 283 320 - -
Ahy10g2601 727 MobiDBLite consensus disorder prediction 537 559 - -
Ahy10g2601 727 ProSitePatterns Trp-Asp (WD) repeats signature. 302 316 IPR019775 -
Ahy10g2601 727 PANTHER WD40 REPEAT PROTEIN 68 717 IPR045245 GO:0031124
Ahy10g2601 727 ProSiteProfiles Trp-Asp (WD) repeats profile. 325 366 IPR001680 GO:0005515
Ahy10g2601 727 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 411 442 - -
Ahy10g2601 727 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 199 231 - -
Ahy10g2601 727 MobiDBLite consensus disorder prediction 670 727 - -
Ahy10g2601 727 ProSiteProfiles Trp-Asp (WD) repeats profile. 367 399 IPR001680 GO:0005515
Ahy10g2601 727 ProSiteProfiles Trp-Asp (WD) repeats profile. 157 189 IPR001680 GO:0005515
Ahy10g2601 727 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 241 273 - -
Ahy10g2601 727 ProSiteProfiles Trp-Asp (WD) repeats profile. 199 231 IPR001680 GO:0005515
Ahy10g2601 727 ProSiteProfiles Trp-Asp (WD) repeats profile. 241 282 IPR001680 GO:0005515
Ahy10g2601 727 SMART WD40_4 276 315 IPR001680 GO:0005515
Ahy10g2601 727 SMART WD40_4 192 231 IPR001680 GO:0005515
Ahy10g2601 727 SMART WD40_4 234 273 IPR001680 GO:0005515
Ahy10g2601 727 SMART WD40_4 403 443 IPR001680 GO:0005515
Ahy10g2601 727 SMART WD40_4 145 189 IPR001680 GO:0005515
Ahy10g2601 727 SMART WD40_4 360 400 IPR001680 GO:0005515
Ahy10g2601 727 SMART WD40_4 318 357 IPR001680 GO:0005515
Ahy10g2601 727 Gene3D - 315 450 IPR015943 GO:0005515
Ahy10g2601 727 MobiDBLite consensus disorder prediction 651 727 - -
Ahy10g2601 727 MobiDBLite consensus disorder prediction 15 56 - -
Ahy10g2601 727 PRINTS G protein beta WD-40 repeat signature 260 274 IPR020472 -
Ahy10g2601 727 PRINTS G protein beta WD-40 repeat signature 302 316 IPR020472 -
Ahy10g2601 727 PRINTS G protein beta WD-40 repeat signature 430 444 IPR020472 -
Ahy10g2601 727 SUPERFAMILY beta-sandwich domain of Sec23/24 5 76 - -
Ahy10g2601 727 MobiDBLite consensus disorder prediction 506 573 - -
Ahy10g2601 727 ProSiteProfiles Trp-Asp (WD) repeats profile. 411 442 IPR001680 GO:0005515
Ahy10g2601 727 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 367 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2601 Ahy-Chr10 115502143 115511622 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3162 20 142265270 142274165 Ahy10g2601 10 115502143 115511622 hybridization