Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2585 ATGGAAGACAAAGACGAGGACAGTAATAACAACAAAAATAACAACCAACATCATCATAACCACCCAAAAGAAGAGCCACTAATAATAAGAAAACACAACACTATTGGGGGCGGGAGTGGCAGCGGCAGCGGCGGCGACAGATTAAAGAGAGATGAGTGGAGTGAAGGAGCGGTTTCCACCCTTCTAGAAGCATACGAATCAAAATGGGTTCTTAGAAACAGAGCAAAGCTCAAAGGCCATGACTGGGAAGATGTTGCAAGACACGTGTCATCAAGAGCCAACTCTACAAAATCGCCCAAGACACAAACGCAGTGCAAGAACAAGATCGAGTCCATGAAGAAACGCTACAGATCAGAGTCTGCTACCGCTGATGCTTCATCTTGGCCGTTATATTCACGCCTTGATCTTCTCTTGCGTGGGACGGGGCCTGTGCCCACAGCTTCCACGCTTGCAGCTTCGCCACTGCCACTGTCACCAACACTGCAGGCAGTGCCGGTGACAGTGACGGTGGCTGCTGCTGCAGCGACTGGTTCTCATCAGTCGCTACACTTTAGCAATAACCAACAACCTTTGATGTTGTTGGAGCAGCCGCCGTCGTCACAAGCCCTCCATCAACCACCGCCACCTCCTGGTGCTGTTGCTGCTCCTCCACCTCCTGCCACCACTACGCAAAATTCGCATGGATCCAATGGCGTTGAGAGAGTGATAACAAAGGAAGATGGGTTATTGGGAACAAAGTCATGTGAGCATATATCTAACAAGAATGAAGTAGAGACTGATAGCAGCACACCAGCACTGTATAGTGAAAAGGATAAGCTTAGATGCAACAAGAGGAAGATGAAGATGGAGAGCAACAAGCAGCGGCGGCGAAAGGAGGAGATGGAGATAGCAGGAAGCATAAGGTGGCTTGCAGAAGTTGTGGTGAGATCGGAGCAAGCAAGAATGGACACAATGAAGGAGATTGAAAAGATGAGAGTCGAAGCTGAGGCCAAGCGCGCTGAAATGGATCTCAAGAGAACTGAAATCATTGCCAATACACAGTTAGAGATTGCTAGAATCTTCGCAAGTGTTAATAACAAAGGTGTGGATTCATCGCTCAGAATTGGCAGAAGTTAA 1116 0.4821 MEDKDEDSNNNKNNNQHHHNHPKEEPLIIRKHNTIGGGSGSGSGGDRLKRDEWSEGAVSTLLEAYESKWVLRNRAKLKGHDWEDVARHVSSRANSTKSPKTQTQCKNKIESMKKRYRSESATADASSWPLYSRLDLLLRGTGPVPTASTLAASPLPLSPTLQAVPVTVTVAAAAATGSHQSLHFSNNQQPLMLLEQPPSSQALHQPPPPPGAVAAPPPPATTTQNSHGSNGVERVITKEDGLLGTKSCEHISNKNEVETDSSTPALYSEKDKLRCNKRKMKMESNKQRRRKEEMEIAGSIRWLAEVVVRSEQARMDTMKEIEKMRVEAEAKRAEMDLKRTEIIANTQLEIARIFASVNNKGVDSSLRIGRS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2585 371 MobiDBLite consensus disorder prediction 198 232 - -
Ahy10g2585 371 MobiDBLite consensus disorder prediction 1 51 - -
Ahy10g2585 371 MobiDBLite consensus disorder prediction 1 30 - -
Ahy10g2585 371 MobiDBLite consensus disorder prediction 201 217 - -
Ahy10g2585 371 Gene3D - 53 118 - -
Ahy10g2585 371 MobiDBLite consensus disorder prediction 218 232 - -
Ahy10g2585 371 Coils Coil 314 343 - -
Ahy10g2585 371 Pfam Myb/SANT-like DNA-binding domain 50 136 IPR044822 -
Ahy10g2585 371 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 34 367 IPR044823 -
Ahy10g2585 371 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 34 367 - -
Ahy10g2585 371 Coils Coil 277 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2585 Ahy-Chr10 115341514 115344653 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy10g2585 Myb_DNA-bind_4 9.10E-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3146 20 142145964 142149863 Ahy10g2585 10 115341514 115344653 hybridization