Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2553 ATGGAAACAAAACTGACCACTACTCTGCATAGATTATTTCTTTGGTTCTTCTTGATGAACATCTTCATCACCATTACCAGAACAAAAGCACAATCATCAACCCTAAACTACGTTGGAGATGACTGCCAAAACTCAACAAAACAATCTCTAACAACTGGATTCAAAACCAACCTCAACAGCGTCCTCTCATGGCTTTCCTCTGATGCTACCACAAGCAAGGGCTACAACTATACCACCGTCGGAACCACCACCCGTGATGCCGTCTATGGCTTCTACAACTGCAGAGGTGATGTCACCGGAACCTTCTGCCAGTTTTGCCTCTCCACCGCAGCTTCAGACATTCTCCAGCACTGCCCAAACAGGTCATCAGCAGTGATATGGTATAACTACTGCATACTCAGATACTCTAACCATGACTTCTATGGTAACCTTACAATAACTCCATCATGGCAAACTCTTGGGACCAAGAACAGCACCAACAGCACACAAGAACTCCAGAAAGCAGAGACTTATATGCAGAGCTTGATAAAGAATGCTACTGCAGAGAGCAATTACCTGTTGTATGCAGTGGGTGAGTTCAATGCTGGTGGTTCATTAGGGAAAAGATATGGATTGGTGCAATGTACTAGGGACCTTACTAGTGACAAGTGTAGGCAGTGTTTGAATGCTATGTTGGATCAAGTTCCTAAATGCTGTGCTTCAAAAGTTGGATGGCAAGTTGGATCTCCAAGCTGTTTGACAAGGTATGATGATTATATGTTCTACAAGATTCAAGGATCTTCTCCTTTGCCTAATTCAGCCAAGAACAATTCAAGCAAGACAAAAACTGTGATCATCATCATAGTGTGTGTGTTGGTGCCAGTAGTGATACTAATTTCTGGCGTCTACTTATTATGGAGGAAGAATCAAATAAATAATGATGCATTTTTGTCAGAGGACACTCCTATATCAGTACATGATAACTCTCAAGAAGGTCAAGGAGACGATTCATTGAATGCCGACCTTCCTGCAGTTCCTCTGATTTGGATTCAACAGAGCACTAATAACTTTTCAAATTCTTGCAAATTAGGGGAAGGTGGTTTTGGTCCTGTTTATAAGGGAAGTTTACAAGATGGGACAGAAGTTGCCATCAAAAGACTTTCAAAAACATCTGGTCAAGGTTTGTATGAGTTCAAGAATGAAGTAATATTCATAGCCAAATTACAACATAGGAACCTTGGACTGTTGGGTTGTTGTGTTGAGCAAAATGAAAAGCTGCTTATATACGAGTACATGTCCAATTCAAGCCTTGCCCTTCACCTATTTGATGTGGAAAAACGAAAGCATCTAAGTTGGAAGGTTCGAATGAATATTATCAAAGGAATCGCACGAGGACTTCTATACCTTCACGAAGATTCTAGACTTAAAGTAATTCATAGAGATATGAAAGCTAGTAATGTTCTGCTTGATCAAGATATGAATCCAAAAATTTCAGATTTTGGATTAGCAAGAGCATTTGAAAAAGGCCAAGACGAAGAAAATACTAGAAGGGTTATGGGCACCTACGGATATATGGCTCCCGAATATGCCATGGAAGGATTATATTCAGCAAAATCAGATGTTTTTAGTTTTGGAGTTCTTCTACTAGAAATCATTTCTGGCAAAAAGAGCAGCGGATTCTATTTTTCAGAACATGGTCAAAGTCTTCTTGTATATAGTTGGAAACTATGGTGTAAAGGAGAATGTTTGGAGCTAGTAGATCCTATACTAGAAGATAAATACCCAAGAAATGAAGTTAAAAGGTATATACATATTGGTTTACTGTGTGTACAAGCAGATGCAGTAGATCAACCAACAATGTCTACAATTGTTGTGATGCTAGCAAACGAGACAATGTCACTTCCTAATCCTAACCATCCTGCATTTTCAGTTGGAAGAAAGATCAAAGACGAGCCACCATCAAATACTTTTGTTAAGGATCTTTCGGTCAATAAAATATCAGTTTCAAATAGTTTACCTAGGTACAACAACAATGATATAACTAATCACACATTCACACACATTCATCAAATGATGGAAGCAAAACTCACTGGTTCCCTCCATAGATTATTTCTTTGGTTCTTGTTGATGAACATCTTCATCACCATCACCAGAACAAGAGCACAATCATCATCACTGAACTACGTTGGAGATGACTGCCAAAACTCAACACAACAATCTCTAACAACTGGATTCAAAACCAACCTCAACAGCCTCCTCTCATGGCTTTCATCTGATGGTGCCACAAGCAAGGGCTACAACTATACCACCGTTGGAACCGCCACACGCGATGTCATCTATGGCTTCTATAACTGCAGAGGTGATGTCACTGGAACCTTCTGCCAGTTTTGCCTCTCCACTGCAGCCGCAGACATTCCTCAGCACTGCCCAAACAGGTCATCAGCAGTGATATGGTATAACTACTGCATATTCAGATACTCCAACCATGCCTTCTATGGTAATCTTACAACAACCCCATCATGGCAAGTTCTTGGAACCAAGAACACCACCAACAGCACACAAGAACTCCAGAAAGCTGAGACTTATATGCAGATTTTGATAAAGAATGCTACTGCGGAGAGCAATTACCTGTTGTATGCAGTGGGTGAGTTCAATGCTGGTGGTTCATTAGGGAAAAGATATGGATTGGTGCAATGTACTAGGGACCTTACTAGTGACAAGTGTAGGCAGTGTTTGAATGCTATGTTGGATCAAGTTCCTAAATGCTGTGCTTCAAAAGTTGGATGGCAAGTTGGATCTCCAAGCTGTTTGACAAGGTATGATGATTATATGTTCTACAAGATTCAAGGATCTTCTCCCTTGCCTAGTTCAGCCAAGAACAGTTCAAGTAAGACAAAAACTTTGATTATCATCATAGTGAGTGTGTTTGTGCCAGTAATCCTACTAATTAGTGGCATCTACTTCATATGGAGGAAGAATCAATCAAATAATGATGCATTATTGTGTGAGAGCGCTCCTATATCAATAAATTATAACTCTCAAGAAGGTCAAGGAGAAAGTCAAGGAGACGATTCATTGAATGCTGACCTTCCTACAGTCCCTCTAATTTGGATTCGACAGAGCACTAATAACTTTTCAGATTCTTGCAAATTAGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGAAGTTTGCAAGATGGGACAGAAGTTGCCATCAAAAGACTTTCTAAAACATCTGGCCAAGGTTTATATGAGTTCAAGAATGAAGTAATATTCATAGCCAAATTACAACATAGAAACCTTGTGAGACTGTTGGGTTGTTGTGTTGAGCAAAATGAAAAGCTGCTTATATACGAATACATGTCGAATTCAAGCCTTGCCCTTCACCTATTCGATGTGGAAAAGCGAAAGCAACTAAGTTGGAAGGTTCGAATGAATATTATTAAAGGAATCGCACGAGGACTTCTATACCTACACGAAGATTCTAGACTTAGAGTAATTCATAGAGATATGAAAGCTAGTAATGTTCTACTTGATCAAGATATGAATCCAAAAATATCAGATTTTGGATTAGCAAGAACATTTGAAAAAGGCCAGAACGAAGACAGTACTAGAAGGGTTGTGGGTACCTACGGATATATGGCTCCTGAATATGCCATGGAAGGATTATACTCAGTAAAATCAGATGTTTTTAGTTTTGGAGTTCTTCTACTAGAAATCATTTGTGGCAAAAGGAATAATAAATTCTATGTTTCAGAACATGGTCAAAGTCTTCTTGAATATAGTTGGAGACTATGGTGTACAGGAGAATGTTTAAAGCTAGTAGATCCTATATTAGAAAATAAATACACAAGAAATGAAGTTACAAGGTGTATACATATTGGTTTATTGTGTGTACAAGAAGATGCAGTAGATCGGCCGACAATGTCAACGGTGGTTGTTATGCTAGCAAGTGAGACAATGACACTTCCTATTCCTAATCATCCTGCATTTTCAGTTGGAAGAAAGATCAAAGAAGAGCCAACATCAAGTGCTTTTGATAAGGATCCTTTGGTCAATGAAGTATCAATTTCAAATATTCTACCTAGATAA 4071 0.3908 METKLTTTLHRLFLWFFLMNIFITITRTKAQSSTLNYVGDDCQNSTKQSLTTGFKTNLNSVLSWLSSDATTSKGYNYTTVGTTTRDAVYGFYNCRGDVTGTFCQFCLSTAASDILQHCPNRSSAVIWYNYCILRYSNHDFYGNLTITPSWQTLGTKNSTNSTQELQKAETYMQSLIKNATAESNYLLYAVGEFNAGGSLGKRYGLVQCTRDLTSDKCRQCLNAMLDQVPKCCASKVGWQVGSPSCLTRYDDYMFYKIQGSSPLPNSAKNNSSKTKTVIIIIVCVLVPVVILISGVYLLWRKNQINNDAFLSEDTPISVHDNSQEGQGDDSLNADLPAVPLIWIQQSTNNFSNSCKLGEGGFGPVYKGSLQDGTEVAIKRLSKTSGQGLYEFKNEVIFIAKLQHRNLGLLGCCVEQNEKLLIYEYMSNSSLALHLFDVEKRKHLSWKVRMNIIKGIARGLLYLHEDSRLKVIHRDMKASNVLLDQDMNPKISDFGLARAFEKGQDEENTRRVMGTYGYMAPEYAMEGLYSAKSDVFSFGVLLLEIISGKKSSGFYFSEHGQSLLVYSWKLWCKGECLELVDPILEDKYPRNEVKRYIHIGLLCVQADAVDQPTMSTIVVMLANETMSLPNPNHPAFSVGRKIKDEPPSNTFVKDLSVNKISVSNSLPRYNNNDITNHTFTHIHQMMEAKLTGSLHRLFLWFLLMNIFITITRTRAQSSSLNYVGDDCQNSTQQSLTTGFKTNLNSLLSWLSSDGATSKGYNYTTVGTATRDVIYGFYNCRGDVTGTFCQFCLSTAAADIPQHCPNRSSAVIWYNYCIFRYSNHAFYGNLTTTPSWQVLGTKNTTNSTQELQKAETYMQILIKNATAESNYLLYAVGEFNAGGSLGKRYGLVQCTRDLTSDKCRQCLNAMLDQVPKCCASKVGWQVGSPSCLTRYDDYMFYKIQGSSPLPSSAKNSSSKTKTLIIIIVSVFVPVILLISGIYFIWRKNQSNNDALLCESAPISINYNSQEGQGESQGDDSLNADLPTVPLIWIRQSTNNFSDSCKLGEGGFGPVYKGSLQDGTEVAIKRLSKTSGQGLYEFKNEVIFIAKLQHRNLVRLLGCCVEQNEKLLIYEYMSNSSLALHLFDVEKRKQLSWKVRMNIIKGIARGLLYLHEDSRLRVIHRDMKASNVLLDQDMNPKISDFGLARTFEKGQNEDSTRRVVGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIICGKRNNKFYVSEHGQSLLEYSWRLWCTGECLKLVDPILENKYTRNEVTRCIHIGLLCVQEDAVDRPTMSTVVVMLASETMTLPIPNHPAFSVGRKIKEEPTSSAFDKDPLVNEVSISNILPR* 1357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2553 1356 Gene3D Phosphorylase Kinase; domain 1 1001 1113 - -
Ahy10g2553 1356 Gene3D Phosphorylase Kinase; domain 1 315 424 - -
Ahy10g2553 1356 SMART serkin_6 1038 1272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g2553 1356 SMART serkin_6 350 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g2553 1356 SUPERFAMILY Protein kinase-like (PK-like) 335 635 IPR011009 -
Ahy10g2553 1356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Ahy10g2553 1356 ProSiteProfiles Gnk2-homologous domain profile. 830 938 IPR002902 -
Ahy10g2553 1356 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Ahy10g2553 1356 Gene3D Transferase(Phosphotransferase) domain 1 425 630 - -
Ahy10g2553 1356 Gene3D Transferase(Phosphotransferase) domain 1 1114 1316 - -
Ahy10g2553 1356 SUPERFAMILY Protein kinase-like (PK-like) 1023 1324 IPR011009 -
Ahy10g2553 1356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1159 1171 IPR008271 GO:0004672|GO:0006468
Ahy10g2553 1356 Gene3D - 719 824 IPR038408 -
Ahy10g2553 1356 Gene3D - 35 140 IPR038408 -
Ahy10g2553 1356 Gene3D - 147 254 IPR038408 -
Ahy10g2553 1356 Gene3D - 831 938 IPR038408 -
Ahy10g2553 1356 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 715 1353 - -
Ahy10g2553 1356 ProSiteProfiles Protein kinase domain profile. 350 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g2553 1356 CDD STKc_IRAK 1044 1309 - -
Ahy10g2553 1356 ProSiteProfiles Gnk2-homologous domain profile. 720 824 IPR002902 -
Ahy10g2553 1356 Pfam Salt stress response/antifungal 42 137 IPR002902 -
Ahy10g2553 1356 Pfam Salt stress response/antifungal 847 936 IPR002902 -
Ahy10g2553 1356 Pfam Salt stress response/antifungal 726 821 IPR002902 -
Ahy10g2553 1356 Pfam Salt stress response/antifungal 158 252 IPR002902 -
Ahy10g2553 1356 Pfam Protein tyrosine and serine/threonine kinase 1042 1306 IPR001245 GO:0004672|GO:0006468
Ahy10g2553 1356 Pfam Protein tyrosine and serine/threonine kinase 354 618 IPR001245 GO:0004672|GO:0006468
Ahy10g2553 1356 CDD STKc_IRAK 356 620 - -
Ahy10g2553 1356 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 664 - -
Ahy10g2553 1356 ProSiteProfiles Protein kinase domain profile. 1038 1324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g2553 1356 PANTHER PROTEIN KINASE DOMAIN 715 1353 - -
Ahy10g2553 1356 PANTHER PROTEIN KINASE DOMAIN 31 664 - -
Ahy10g2553 1356 ProSiteProfiles Gnk2-homologous domain profile. 146 254 IPR002902 -
Ahy10g2553 1356 Pfam Domain of unknown function (DUF3403) 1311 1356 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2553 Ahy-Chr10 115034228 115045539 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2553 4 666 Receptor kinase-like Gene Family AT4G05200 42.098 2.20e-155 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy10g2553 PK_Tyr_Ser-Thr 1.30E-47 CL0016