Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2550 ATGATGGAAACGAAGCTCACTACTACTATCCTTGGATTCTTCTTGCTGAGCTTCTTCATCTGCTTCACCACAACAAGAGCACAATCATACCACTACGTTGGAGATGACTGCAAAAACTCGACGGAAGAATCTCTAACAAGTGGATTCAAAACCAACCTCAGCAGCGTCCTCTCATGGCTTTCCTCTGATGCTGCCACAAGCAAGGGATACAACCACACCGCCATCGGAACCGCCACTGGCGATGCCGTCTATGGCCTCTATGACTGCCGAGGTGACGTGACAGGCACCTTCTGCCAGTTTTGCGTGTTCGAAGCAGCTTCAGACATTGTTCGGCGCTGTCCAAACAGATCATCAGCAGTGATATGGTATAACTACTGCATACTCAGATACTCCAACCATGACTTCTTTGGTAACCTTACAATAACCCCATCATGGCAATTTCCTGGGACCAAGAACACCACCAACAGCACACAAGAACTCCAGAAAGCAGAGACTTACATGCAGAGCTTGATCAAGAATGCTACTGTGGAGACCAACTTGCTGTATGCAATGGGTGAGTTCAATTCTGGTGGTTCATCAGGGGAAAGGTATGGGTTCGTGCAGTGTAGTAGGGACCTTACTAGTGATCAGTGTAGGCAGTGTTTGAATGCTATGTTGGATCAAGTTCCTAAATGCTGTGCTACAAAAGTTGGATGGCAAGTTGGAGCTCCAAGTTGTTTGATCAAGTATGATGATTTTATGTTCTACAAGATTACTACCAGTCAAGGACCTTCTCCATCATTCAATTCAGGCAATAACAAGGGTACAAGTAAGACAAAAACCTTGATAATCATCATAGTGAGTGTGTTGGTGGCATTAGTTCTACTAAGTTGTGGCATCTACTTCTTATGGAGGAAGAATCAATCAAATCATGATGCATTATTGTCAGAGACCACTCCTATATCAATACATTATAACCCTTATCAAGGTCAAGGAGACGATTCATTGAATGCTGACCTTCCTACAATCCCTCTATTTTGGATTCGACAGAACACTAATAACTTTTCAGATTCTTGCAAATTAGGGGAAGGTGGATTTGGTCCTGTTTATAAGGGAAGCTTACAAGATGGGACAGAAGTTGCCATCAAAAGACTCTCAAAAACATCTGGCCAAGGTTTAGATGAGTTCAAGAATGAAGTAATCTTCATAGCCAAACTACAACATAGGAACCTTGTGAGACTGTTGGGTTGTTGTGTTGAGGAAAATGAAAAGCTGCTTATATACGAGTACATGTCCAATTCAAGCCTTGCCCTTCATCTATTCGACGTGGAAAAACGAAAGCAACTAAGTTGGAAGGTTCGAATGAATATTATCAAAGGAATCGCACGAGGACTTCTGTACCTTCATGAAGATTCTAGACTTAAAATAATTCATAGAGATATGAAAGCTAGTAATGTTCTACTTGATCAAGATATGAATCCAAAAATATCAGATTTTGGATTAGCAAGGACATTTGAAAAAGGCCAGAATGAAGAAAACACTAGAAGAGTTATGGGCACCTACGGATATATGGCTCCAGAATATGCTATGGAAGGGTTATATTCCGTAAAATCAGACGTTTTTAGTTTTGGAGTTCTTTTACTAGAAATCATTGCTGGCAAAAGGAACAGTGGATTCTATCTTTCAGATCATGGTCAAAGTCTTCTTGTATATAGTTGGAAACTATGGTGTGAAGGAGAATGTTTAGAGTTAGTAGATCCTATATTAGAAAATACATACATAAGAAGTGAAGTTATAAGGTGTATTCATATTGGTTTGCTGTGTGTACAAGAAGATGCAATAGATCGACCAACAATGTCTACAGTGGTTGTTATGCTAGCAAGTGAGACAATGACACTTCCTAATCCTAATCATCCTGCATTTTCAGTTGGAAGAAAGTTCGGTAAAGAAGACGAGTCAACGTCAAAGACTTCTAAAGATAATATCTCTGTCAATGAAGTATCAATGTCAAATATTTTTCCTAGATAA 2007 0.4011 MMETKLTTTILGFFLLSFFICFTTTRAQSYHYVGDDCKNSTEESLTSGFKTNLSSVLSWLSSDAATSKGYNHTAIGTATGDAVYGLYDCRGDVTGTFCQFCVFEAASDIVRRCPNRSSAVIWYNYCILRYSNHDFFGNLTITPSWQFPGTKNTTNSTQELQKAETYMQSLIKNATVETNLLYAMGEFNSGGSSGERYGFVQCSRDLTSDQCRQCLNAMLDQVPKCCATKVGWQVGAPSCLIKYDDFMFYKITTSQGPSPSFNSGNNKGTSKTKTLIIIIVSVLVALVLLSCGIYFLWRKNQSNHDALLSETTPISIHYNPYQGQGDDSLNADLPTIPLFWIRQNTNNFSDSCKLGEGGFGPVYKGSLQDGTEVAIKRLSKTSGQGLDEFKNEVIFIAKLQHRNLVRLLGCCVEENEKLLIYEYMSNSSLALHLFDVEKRKQLSWKVRMNIIKGIARGLLYLHEDSRLKIIHRDMKASNVLLDQDMNPKISDFGLARTFEKGQNEENTRRVMGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIIAGKRNSGFYLSDHGQSLLVYSWKLWCEGECLELVDPILENTYIRSEVIRCIHIGLLCVQEDAIDRPTMSTVVVMLASETMTLPNPNHPAFSVGRKFGKEDESTSKTSKDNISVNEVSMSNIFPR* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2550 668 Gene3D - 30 135 IPR038408 -
Ahy10g2550 668 Gene3D - 144 248 IPR038408 -
Ahy10g2550 668 SMART serkin_6 348 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g2550 668 Pfam Domain of unknown function (DUF3403) 621 668 IPR021820 GO:0004674
Ahy10g2550 668 ProSiteProfiles Protein kinase domain profile. 348 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g2550 668 PANTHER PROTEIN KINASE DOMAIN 22 665 - -
Ahy10g2550 668 ProSiteProfiles Gnk2-homologous domain profile. 31 135 IPR002902 -
Ahy10g2550 668 CDD STKc_IRAK 354 619 - -
Ahy10g2550 668 Gene3D Phosphorylase Kinase; domain 1 319 423 - -
Ahy10g2550 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Ahy10g2550 668 Pfam Salt stress response/antifungal 154 244 IPR002902 -
Ahy10g2550 668 Pfam Salt stress response/antifungal 37 132 IPR002902 -
Ahy10g2550 668 ProSiteProfiles Gnk2-homologous domain profile. 141 248 IPR002902 -
Ahy10g2550 668 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 665 - -
Ahy10g2550 668 SUPERFAMILY Protein kinase-like (PK-like) 333 632 IPR011009 -
Ahy10g2550 668 Gene3D Transferase(Phosphotransferase) domain 1 424 628 - -
Ahy10g2550 668 Pfam Protein tyrosine and serine/threonine kinase 352 563 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2550 Ahy-Chr10 115012032 115021022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2550 2 668 Receptor kinase-like Gene Family AT4G05200 41.679 1.12e-176 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy10g2550 PK_Tyr_Ser-Thr 9.80E-48 CL0016