Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2549 ATGATGGAAACGAAGCTCACTACTACTATCCTTGGATTCTTCTTGCTGAGCTTCTTCATCTGCTTCACCACAACAAGAGCACAATCATCATCCCCAAACTACGTTGGAGATGATTGCAAAAACTCGACGGAAGAATCCCTAACAAGTGGATTCAAAACCAACCTCAACAGCGTCCTCTCATGGCTTTCCTCTGATGCTGCCACAAGCAAGGGCTACAACCATACCGCCATCGGAACCGCCACTGGCGATGCCGTCTATGGCCTCTATGACTGCCGAGGTGACGTGACAGGCACCTTCTGCCAGTTTTGCGTGTCCACAGCAGCTTCAGACATTGTTCAGCACTGTCCAAACAGATCATCAGCAGTGATATGGTATAACTACTGCATACTCAGATACTCCAACCATGACTTCTTTGGAAACCTTACAATAACCCCATCATGGCAATTTCCTGGGACCAAGAACACCACCAACAGCACACAAGAACTCCAGGAAGCAGAGACTTACATGCAGAGCTTGATAAAGAATGCTACTGTGGAGACCAACTTGCTGTATGCAATGGGTGAGTTCAATTCTGGTGGTTCATCAGGGGAAAGGTATGGGTTCGTGCAGTGTAGCAGGGACCTTACTAGTGATCAGTGTAGGCAGTGTTTGAATGCTATGTTGGATCAAGTTCCTAAATGCTGTGCTACCAAAGTTGGATGGCAAGTTTTGGCTCCAAGTTGTTTGATCAAGTATGATGATTTTATGTTCTACAAGATTACTACCAGTCAAGCACCTTCTCCATTATTGAATTCAGGCAATAACAAGGGTACAAGTAAGACAAAAACTGTGATAATCATCATAGTGAGTGTGTTGGTGGCATTAGTTCTACTAAGTTGTGGCATCTACTTCTTATGGAGGAAGAATCAATCAAATCATGATGCATTATTGTCAGAGACCACTCCTATATCAATACATTATAACCCTTATCAAGGTCAAGGAGATGATTCATTGAATGCTGACCTTCCTACAATCCCTCTATTTTGGATTCGACAGAACACTAATAACTTTTCAGATTCTTGCAAATTAGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGAAGCTTACAAGATGGGACAGAAGTTGCCATCAAAAGACTCTCAAAAACATCTGGCCAAGGTTTAGATGAGTTCAAGAATGAAGTAATATTCATAGCCAAACTACAACATAGGAACCTTGTGAGACTGTTGGGTTGTTGTGTTGAGGAAAATGAAAAGCTGCTTATATACGAGTACATGTCCAATTCAAGCCTTGCCCTTCATCTATTCGACGTGGAAAAACGAAAGCAACTAAGTTGGAAGGTTCGAATGAATATTATCAAAGGAATCGCACGAGGACTTCTGTACCTTCACGAAGATTCTAGACTTAAAATAATTCATAGAGATATGAAAGCTAGTAATGTTCTACTTGATCAAGATATGAATCCAAAAATATCAGATTTTGGATTAGCAAGGACATTTGAAAAAGGCCAGAATGAAGAAAACACTCGAAGGGTTATGGGCACCTACGGATATATGGCTCCCGAATATGCCATGGAAGGGTTATATTCAGTAAAATCAGACGTTTTTAGTTTTGGAGTTCTTTTACTAGAAATCATTGCTGGCAAAAGAAATAGTGGATTCTATCTTTCAGATCATGGTCAAAGTCTTCTTGTATATAGTTGGAAACTATGGTGTGAAGGAGAATGTTTAGAGTTAGTAGATCCTATATTAGAAAATACATACATAAGAAGTGAAGTTATAAGGTGTATTCATATTGGTTTGCTGTGTGTACAAGAAGATGCAATAGATCGACCAACAATGTCTACGGTGGTTGTTATGCTAGCAAGCGAGACAATGACACTTCCTAATCCTAATCATCCTGCATTTTCAGTTGGAAGAAAGTTCGGTAAAGAAGACGAATCAACGTCAAAGACTTCTAAAGATAATATCTCTGTCAATGAAGTATCAATGTCAAATGTTTTTCCTAGATAA 2013 0.4009 MMETKLTTTILGFFLLSFFICFTTTRAQSSSPNYVGDDCKNSTEESLTSGFKTNLNSVLSWLSSDAATSKGYNHTAIGTATGDAVYGLYDCRGDVTGTFCQFCVSTAASDIVQHCPNRSSAVIWYNYCILRYSNHDFFGNLTITPSWQFPGTKNTTNSTQELQEAETYMQSLIKNATVETNLLYAMGEFNSGGSSGERYGFVQCSRDLTSDQCRQCLNAMLDQVPKCCATKVGWQVLAPSCLIKYDDFMFYKITTSQAPSPLLNSGNNKGTSKTKTVIIIIVSVLVALVLLSCGIYFLWRKNQSNHDALLSETTPISIHYNPYQGQGDDSLNADLPTIPLFWIRQNTNNFSDSCKLGEGGFGPVYKGSLQDGTEVAIKRLSKTSGQGLDEFKNEVIFIAKLQHRNLVRLLGCCVEENEKLLIYEYMSNSSLALHLFDVEKRKQLSWKVRMNIIKGIARGLLYLHEDSRLKIIHRDMKASNVLLDQDMNPKISDFGLARTFEKGQNEENTRRVMGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIIAGKRNSGFYLSDHGQSLLVYSWKLWCEGECLELVDPILENTYIRSEVIRCIHIGLLCVQEDAIDRPTMSTVVVMLASETMTLPNPNHPAFSVGRKFGKEDESTSKTSKDNISVNEVSMSNVFPR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2549 670 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Ahy10g2549 670 Gene3D Transferase(Phosphotransferase) domain 1 426 630 - -
Ahy10g2549 670 Gene3D - 33 137 IPR038408 -
Ahy10g2549 670 Gene3D - 146 250 IPR038408 -
Ahy10g2549 670 ProSiteProfiles Protein kinase domain profile. 350 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g2549 670 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 24 667 - -
Ahy10g2549 670 SMART serkin_6 350 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g2549 670 PANTHER PROTEIN KINASE DOMAIN 24 667 - -
Ahy10g2549 670 Pfam Salt stress response/antifungal 158 246 IPR002902 -
Ahy10g2549 670 Pfam Salt stress response/antifungal 39 134 IPR002902 -
Ahy10g2549 670 CDD STKc_IRAK 356 621 - -
Ahy10g2549 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Ahy10g2549 670 Gene3D Phosphorylase Kinase; domain 1 321 425 - -
Ahy10g2549 670 SUPERFAMILY Protein kinase-like (PK-like) 335 634 IPR011009 -
Ahy10g2549 670 Pfam Domain of unknown function (DUF3403) 623 670 IPR021820 GO:0004674
Ahy10g2549 670 Pfam Protein tyrosine and serine/threonine kinase 354 565 IPR001245 GO:0004672|GO:0006468
Ahy10g2549 670 ProSiteProfiles Gnk2-homologous domain profile. 143 250 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2549 Ahy-Chr10 114988725 114995216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2549 15 670 Receptor kinase-like Gene Family AT4G05200 42.878 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy10g2549 PK_Tyr_Ser-Thr 9.90E-48 CL0016