Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2543 ATGGCTGAAGAAGAAGTTCAAGTTGATCAAGTTCAAGTTAATCAACAACAACAAAGGGTAGTGATGATCCAAGATGCATCAAGAGAGGTTAATTTAGAAGCAATTATGATGGCCACCAAAAAGTTCTCTCTCAAATCCGGAGATCATCTCACAATTGTTCCAATTCTTGATTGGTTCAGTAGTCCTATGGGTTACATGATGAGAGTTGATTCCAATTACTTCATTTCAACCAACAAGAAAGTTATTGAAGAACATAGCAAGAGATGGTTAGATCTTCGTAACTCGGATCTCTTCGATCACTTCAAAAAGAATGAGATAAAATTCAAAGTAGAAGTGGTTGCTGGGCCTGCCACAGAAATTGCTTATAATGCTGTTAAAGAATTTCAGGCAACACGTTTGGTACTTGACAAACGTATGCACAAAGAGATAAAGCACAACCTTGACAAATTCTCTTGTCGTCTCTATAAGATAAAAGGTAACAACTCTATTGAAAGGTTGAAGCCTACAAAATCAACAGATAATAATAATAATAGCTGCAAATCACATGGCAAAAGGCATGAAAATGCGGATGAACAATCTTCTCTAGGAATTAGGTCATCATCATCAAGCGACATGTTCTCTTCAAGTATTTACTGCAGCAGCACTGAAGCGTCAACATCATCAAGTGTTGCAAGTTCACGACAACTTGGACAACAAATAGACAACCACCTCGAACAACAACAACCAGATTTCAAAAACCCGGTTTGCAGCAAGTGCAAGAACCGAAGACCGAGGCCGCGGTTGAAGATAGAATTGAGTTACTCGGAGTTGTCGAAAGCGACAAACGGATTCTCTCAAAAGAATTTCTTGTCGGAAGGAGGATTCGGAGCTGTGTACAAGGGACAACTGAGTAACGGAATGAGGGTGGCTGTGAAGCAGCACAAGAACGTAAGCTTCCAAGGAGACAAAGAGTTTCAGTCGGAGGTTAGTGTTCTTAGAGAAGCAAGACATGAGAATGTTTTGATGCTTTTGGGTTCATGCTCCGAGGGACATAACAGGATTCTTGTTTATGAATATGTCTGCAATGGATCCCTTGCTCAACATCTCTCACAACACTCTCGATCACCTCTTAGTTGGGAAGATAGGATCAAAGTAGCAATTGGAGCTGCAAATGGGTTGTTGTATTTACACTCCAAAAACATTATTCACAGAGATTTGCGACCAAACAATATTCTTATCACACATGATCATCATCCTCTGTTAGGCGATTTCGGGTTGGCAAGGATTCAAAATCAAGACTCGATATACTCGACAGAAGTCGTCGGAACGTTAGGATACTTGGCGCCGGAATATGCCGAATGTGGCAAAGTTTCAACCAAAACAGATGTTTACTCTTTTGGTGTTGTTCTTTTAGAGCTAATTACTGGAATGAGAACCATTGACAAAAGACTTGGAGGGAGAAGCCTTGTGGGATGGGCAAGGCCACTATTAAGAGAGAGGAATTATCCAGATTTAATTGATGAAAGGATTAAAGAAGATTATGATATCCATCAACTATTTTGGATGGTTCGTTTAGCTGAGAAATGTTTAAGCAGAGACCCTCAAAGAAGACTCAGTATGCTTGCGGTGGTTAATGCTTTGAATGGCATAGTGGAAGGAAGTACATGCATCAAAATAAAAGAATATTCCCCAGCAAGATCAGACTCATTCTATAGTGATTCTGAATCTGATAATGATGAAGATGAATTGCATGGTTATGAGTCTGAAGAAGGTGAGTTACAAAGTCAACAAACAGAAGAATCCACAGCAAGTGACAATAATAATAATACCACAAATAATCAAATGTTGCAACTAATTGTAAGACAACCCCCTTCACCTCCAATATGCACCTAA 1872 0.3948 MAEEEVQVDQVQVNQQQQRVVMIQDASREVNLEAIMMATKKFSLKSGDHLTIVPILDWFSSPMGYMMRVDSNYFISTNKKVIEEHSKRWLDLRNSDLFDHFKKNEIKFKVEVVAGPATEIAYNAVKEFQATRLVLDKRMHKEIKHNLDKFSCRLYKIKGNNSIERLKPTKSTDNNNNSCKSHGKRHENADEQSSLGIRSSSSSDMFSSSIYCSSTEASTSSSVASSRQLGQQIDNHLEQQQPDFKNPVCSKCKNRRPRPRLKIELSYSELSKATNGFSQKNFLSEGGFGAVYKGQLSNGMRVAVKQHKNVSFQGDKEFQSEVSVLREARHENVLMLLGSCSEGHNRILVYEYVCNGSLAQHLSQHSRSPLSWEDRIKVAIGAANGLLYLHSKNIIHRDLRPNNILITHDHHPLLGDFGLARIQNQDSIYSTEVVGTLGYLAPEYAECGKVSTKTDVYSFGVVLLELITGMRTIDKRLGGRSLVGWARPLLRERNYPDLIDERIKEDYDIHQLFWMVRLAEKCLSRDPQRRLSMLAVVNALNGIVEGSTCIKIKEYSPARSDSFYSDSESDNDEDELHGYESEEGELQSQQTEESTASDNNNNTTNNQMLQLIVRQPPSPPICT* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2543 623 PANTHER TYROSINE KINASE FAMILY PROTEIN 238 566 - -
Ahy10g2543 623 Pfam Protein tyrosine and serine/threonine kinase 280 539 IPR001245 GO:0004672|GO:0006468
Ahy10g2543 623 SMART tyrkin_6 277 540 IPR020635 GO:0004713|GO:0006468
Ahy10g2543 623 CDD STKc_IRAK 283 543 - -
Ahy10g2543 623 PANTHER OS01G0253100 PROTEIN 238 566 IPR045271 GO:0004714|GO:0006468
Ahy10g2543 623 PANTHER OS01G0253100 PROTEIN 22 209 IPR045271 GO:0004714|GO:0006468
Ahy10g2543 623 MobiDBLite consensus disorder prediction 164 178 - -
Ahy10g2543 623 ProSitePatterns Tyrosine protein kinases specific active-site signature. 394 406 IPR008266 GO:0004672|GO:0006468
Ahy10g2543 623 PANTHER TYROSINE KINASE FAMILY PROTEIN 22 209 - -
Ahy10g2543 623 ProSiteProfiles Protein kinase domain profile. 277 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g2543 623 MobiDBLite consensus disorder prediction 560 623 - -
Ahy10g2543 623 Gene3D Phosphorylase Kinase; domain 1 242 352 - -
Ahy10g2543 623 MobiDBLite consensus disorder prediction 583 613 - -
Ahy10g2543 623 SUPERFAMILY Protein kinase-like (PK-like) 264 552 IPR011009 -
Ahy10g2543 623 MobiDBLite consensus disorder prediction 163 202 - -
Ahy10g2543 623 Gene3D Transferase(Phosphotransferase) domain 1 353 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2543 Ahy-Chr10 114928318 114934537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2543 265 547 Trihelix Transcription Factor Family AT5G38560 45.424 3.49e-78 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Ahy10g2543 PK_Tyr_Ser-Thr 3.10E-49 CL0016