Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2533 ATGTCTTCATTCAAATCATACGGCAAAGTTGATGAACATGACCAAATGCTACACCAAACCCAAATAAAAACCCGAAAGAGAATCATAATCATAAGCCTCTCCTCAATAATCCTCGTTGCTGTTGTCCTTGCTGCTGTTTTTGGAATTCTCAATAATTCTCGTGATCATAACTCACAACAAGATGGTACTTATAATAACGGTTCAGTGCTGGCGACGTCGGTGAAGGCGATTTGCGACGTGACATTGTACAAGGAATCATGTTACAGTAGTCTGAGCTCTGTTGTGAACTCATCAGCAGGGGAGGTTAAGCCAGAGGAGCTATTAAGGTTGTCCATTAAGGTGGCCTTAGAAGAAGTCTCAAATGTTGTTAATAGGTTTTTCTCTTCTGATAGTGGGGGGCATAATGGACATTTCCAAGGCTTAAATAATGATGGTAGGGCAAAGGAGGCTTTAGACAATTGTAAAGAGCTTTTGGATCTTGGAGTTGATCATCTTAATAACTCTTTGTCTTCTGTGGATTCCTCTTCCCTTTTTGACACCTTTGATGATCTTCAAACATGGTTAAGTGCTGCAGGTACATACCAACAAACTTGCATTGAAGGGTTTGATGAAGAAAAAGAATCACTAAAATTGAATGCAACAAACTACCTTAAAAACTCAACAGAGTTCACCAGTAACAGCCTGGCCATCATCACATGGATGAAGAAGGCGGCCGCAATGACCGTGAGCCGGCGGCGGCGCTTGCTAAGTTCATCATTTCCAGAGTGGCTTAGTTCCAAGGACAGGAAGTTACTTGGAAGCAAAGAAGAGAGTAATATTGTTGTGGCCAAAGATGGGAGTGGGAAATACAAGACAATATCGGAGGCATTGAAACATGTTCCAGAGAAGAGTAGTAAGAGGACAGTGATTTATGTGAAGAGAGGAGTTTACTATGAGAATGTGAGAGTTGAGAAGAACAAATGGAATGTGATGATGATTGGTGATGGCATGAATGCAACTATTGTTTCTGGTAGCCTTAACTTTGTTGATGGCACACCAACCTTTTCATCTGCTACTTTTGCTGTGTTTGGGAAGAATTTCATAGCAAGAGACATGGGATTTAGAAACACAGCTGGTCCACAGAAGCATCAAGCAGTGGCACTAATGACAACTGGGGATGAAGCTGTTTACTACAGATGCCAAATTGATGCATTTCAAGACACACTCTATGCTCATTCCAATCGCCAATTTTACAGAGAATGCAACATTTTTGGTACTGTTGATTTCATCTTTGGCAACTCTGCTGTTGTCATTCAAAATTGTAACATTTTCCCAAAGTTACCAATTCCTGGCCAGCAGAACACCATCACAGCACAAGGCAAAACTGATCCCAACATGAACACAGGTATCTCAATACAAAATTGCAAGATTTCAGGCTTTGGGAACTTGAGTTCTGTCCAAACATACTTGGGAAGGCCATGGAAGGATTACTCAACCACAGTGTTCATTAGATCCAAAATGGAAGCTTTAATTAACCCAAATGGATGGTTACCTTGGGTAGGAAACTCAGCACCAGACACCATCTATTATGCTGAATTTCAGAACTATGGACCAGGGGCTTCTACAGCAAATAGAGTCAAGTGGAAGGGCTTGAGAGCTATTTCTTCTAAACAAGCTAGCAAGTTTACAGTCAAGACTTTTCTTGGTGGCCAAAGATGGATTCCTGCATCTTCTGCTCCTTTTCAGTCTGATCTGTGA 1737 0.4134 MSSFKSYGKVDEHDQMLHQTQIKTRKRIIIISLSSIILVAVVLAAVFGILNNSRDHNSQQDGTYNNGSVLATSVKAICDVTLYKESCYSSLSSVVNSSAGEVKPEELLRLSIKVALEEVSNVVNRFFSSDSGGHNGHFQGLNNDGRAKEALDNCKELLDLGVDHLNNSLSSVDSSSLFDTFDDLQTWLSAAGTYQQTCIEGFDEEKESLKLNATNYLKNSTEFTSNSLAIITWMKKAAAMTVSRRRRLLSSSFPEWLSSKDRKLLGSKEESNIVVAKDGSGKYKTISEALKHVPEKSSKRTVIYVKRGVYYENVRVEKNKWNVMMIGDGMNATIVSGSLNFVDGTPTFSSATFAVFGKNFIARDMGFRNTAGPQKHQAVALMTTGDEAVYYRCQIDAFQDTLYAHSNRQFYRECNIFGTVDFIFGNSAVVIQNCNIFPKLPIPGQQNTITAQGKTDPNMNTGISIQNCKISGFGNLSSVQTYLGRPWKDYSTTVFIRSKMEALINPNGWLPWVGNSAPDTIYYAEFQNYGPGASTANRVKWKGLRAISSKQASKFTVKTFLGGQRWIPASSAPFQSDL* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2533 578 SUPERFAMILY Pectin lyase-like 271 575 IPR011050 -
Ahy10g2533 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 71 235 IPR035513 -
Ahy10g2533 578 ProSitePatterns Pectinesterase signature 2. 416 425 IPR033131 -
Ahy10g2533 578 PANTHER PECTINESTERASE 5 576 - -
Ahy10g2533 578 SMART PMEI_2 69 230 IPR006501 GO:0004857
Ahy10g2533 578 PANTHER PECTINESTERASE 5 576 - -
Ahy10g2533 578 CDD PMEI-like_3 76 236 - -
Ahy10g2533 578 TIGRFAM PME_inhib: pectinesterase inhibitor domain 70 234 IPR006501 GO:0004857
Ahy10g2533 578 Gene3D - 266 578 IPR012334 -
Ahy10g2533 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 234 IPR035513 -
Ahy10g2533 578 Pfam Plant invertase/pectin methylesterase inhibitor 73 230 IPR006501 GO:0004857
Ahy10g2533 578 Pfam Pectinesterase 272 563 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2533 Ahy-Chr10 114854068 114859761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2533 7 578 Carbohydrate Esterase AT3G10710 54.419 0.0 647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3094 20 141613045 141618992 Ahy10g2533 10 114854068 114859761 hybridization