Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2437 ATGAGTGGTGCTGGGAACATGTCTGATAATAAGGATCCGGGTATCATGCTCTTTGGCATGAAGATTCCTTTGCCGGAGTTTCAGATTCCAGCCAGCTCTCAAATGGGTTGTCAAATTCAGGCAAACTTTGCAGCCATGAATTCTTGCAGCAACCTGAAGAAGACAGAAGTAGAAACTCACTCTGCTCAAAACTCTGAGCAAGAAAAGAATACTTGCGGATCAAGCTACAGCAAACAAGAATCCAAGAACACTGAGGAAGGAAATGAGGAGTGTAGTAACACAGATCAAGAAAGAAGTTTCAAGAAGCCAGAAAAGATTCTTCAGTGTCCACGCTGCAACAGTTTAGAGACTAAGTTTTGTTATTTCAACAACTACAATGTCAATCAACCGCGGCACTTCTGCAAGAACTGTCAAAGATATTGGACTGCTGGTGGAACGATGAGGAATGTTCCGGTTGGAGCCGGAAGGCGGAAGAATAAGCATCTGGCCTCTCAATTCAGACACATAATAGTATCGGAGGGAACTCCGGCCGCAAGGTTAGAACCAAGAGAAGATTCATCTGGTAACAATGGTTCTGTATTGAAATTTGGTCCAGATGTTCCTCTCTGTGAATCCATGGAGTCAATGCTTAGTCTTCGAGATCAGAAGCCAAATGTTGATGCAGCAAGCTCAGCGAATTCTTATTTTCAAAATGAATCGTTAGAACAAAAGTGTTACCCTGTTCCTCCATGGATATTTTCTTGGAATCCAGGTTGGAATAATGGTGGTTCTCCGGTGAGTTTGACTTTTCCGGCAACAATGAGGGGAGTTCCAACCATTTCGCCACCGAATATTCCGTTGCAATTTGTTCCTGGAAGTTTCTGGAACAGAACACAAGTGTGGCCTTCACAAACCGCCGCAGTTTCAATAGGATCCAACGGTTGTCTTTCACCCTCTTCCTCTACTACAAGTAACAGTTGCTGCTCCGGCAATGGCTCTCCGACGCTCGGAAAACACACCAGAGATAGTAATGTCTTGATTGACGACGAGAAATCGGAGATATGTGTTTTGGTTCCAAAGACACTTAGAATTGATGGCCCAAATGAGGCTTCAAGAAAGCACTTGTATGAATCAGAAAATGGTGTTTCGAAAAAGGTGGAACAAAAAGGACAAGGCAAAGAGCGTGTATTAGGTGTGTCTCAAATCTTGGAAGCTAACCCTGCAGCAGTTTCTCGTGTTCATGCATTTCAAGAGAGCACACAATGA 1245 0.4369 MSGAGNMSDNKDPGIMLFGMKIPLPEFQIPASSQMGCQIQANFAAMNSCSNLKKTEVETHSAQNSEQEKNTCGSSYSKQESKNTEEGNEECSNTDQERSFKKPEKILQCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHLASQFRHIIVSEGTPAARLEPREDSSGNNGSVLKFGPDVPLCESMESMLSLRDQKPNVDAASSANSYFQNESLEQKCYPVPPWIFSWNPGWNNGGSPVSLTFPATMRGVPTISPPNIPLQFVPGSFWNRTQVWPSQTAAVSIGSNGCLSPSSSTTSNSCCSGNGSPTLGKHTRDSNVLIDDEKSEICVLVPKTLRIDGPNEASRKHLYESENGVSKKVEQKGQGKERVLGVSQILEANPAAVSRVHAFQESTQ* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2437 414 MobiDBLite consensus disorder prediction 60 81 - -
Ahy10g2437 414 MobiDBLite consensus disorder prediction 60 97 - -
Ahy10g2437 414 Pfam Dof domain, zinc finger 105 161 IPR003851 GO:0003677|GO:0006355
Ahy10g2437 414 ProSitePatterns Zinc finger Dof-type signature. 109 145 IPR003851 GO:0003677|GO:0006355
Ahy10g2437 414 MobiDBLite consensus disorder prediction 82 97 - -
Ahy10g2437 414 PANTHER CYCLIC DOF FACTOR 3-LIKE 7 412 - -
Ahy10g2437 414 PANTHER CYCLIC DOF FACTOR 2 7 412 IPR045174 GO:0003700|GO:0006355
Ahy10g2437 414 ProSiteProfiles Zinc finger Dof-type profile. 107 161 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2437 Ahy-Chr10 113958255 113961340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2437 12 413 C2C2-Dof Transcription Factor Family AT5G39660 35.583 1.54e-66 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy10g2437 zf-Dof 4.30E-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2437 - - aip:107621760 790.03