Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1973 ATGGCTTTTTCTTCTCTGCACATCTGCATGGACTCACCAGATCACTGGTTCCAGGGAACAGTTCACGACGAGGTCTCCGGCGGCAGCGGCAGCGGTGGCATGGATTCTTCTGGCTCGCCATTATCCTCCTCCGGCGACATTATGAAATGCTCGGCAAGGCCAATGAAGGAGAGAAGAATGAGACCCCCACACGACCAAGCCCTCAAGTGCCCCCGCTGCGATTCAACCCACACCAAATTCTGTTACTACAACAACTACAGCCTCTCTCAGCCCCGCTACTTCTGCAAGACCTGCAGAAGGTACTGGACTAAGGGCGGCACCCTCCGCAACATCCCCGTCGGCGGCGGCTGCCGGAAAAACAAGAAACTCTCCTCCAATTCCAAGAAACACCACCAATCCAACAACAACAATAACAATGACAACCAATCACATTCTTATTCTACTTGCCCTAAAGATCTTCAGCTTTCTTTCCCCGATGTCCAATTTTCTCACCTCAGTAACATTATTCTTGGTGGTAACGTTAACCCTAATCATAGTAGCTTCATGGAGAGCAAGTTCCACGTTGGCATGCTTGAGAACAATCTTGTTAGGCCAATCGATTTCATGGAGAGCAAGCTTGAAGGCATAATTGGGAGCGGTATTAATAGTTCTAGAAGCTTTGATTTCTTTGGGAATAATAATAGTAATGGTGGCGGCGACGACAACAGCAATAACAACATCAACATGATGATGCTTGGTATGGCTAATAATGTTGGCTTGGGACCTAACAATTTTCATGCACTTAATTGCTCTCCAATTGCATCATTTGGCGGCATGTCATCACTTAATGGCGGCGGTTGCGGCAACAACAGTGTCAACAACGTTGGTAATAGTTATATTATGGATTCTTCATCTTCATGCCATGAGAGAATGATGCTGACATATGATGATGATAATAATAATGCCACGATTGATGTAAAGCCAAACCCTAAGCTTCTTTCCCTTGAATGGCAGGATCATGGTTGTTCTGATGCAGGAAAAGACTCATTTGGGTACCTCCATAGTCATGGATCATGGTCTGGCATGATCAACGGCTATGGTTCCTCCACAACAAACCCTTTGGTTTAA 1107 0.4607 MAFSSLHICMDSPDHWFQGTVHDEVSGGSGSGGMDSSGSPLSSSGDIMKCSARPMKERRMRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKLSSNSKKHHQSNNNNNNDNQSHSYSTCPKDLQLSFPDVQFSHLSNIILGGNVNPNHSSFMESKFHVGMLENNLVRPIDFMESKLEGIIGSGINSSRSFDFFGNNNSNGGGDDNSNNNINMMMLGMANNVGLGPNNFHALNCSPIASFGGMSSLNGGGCGNNSVNNVGNSYIMDSSSSCHERMMLTYDDDNNNATIDVKPNPKLLSLEWQDHGCSDAGKDSFGYLHSHGSWSGMINGYGSSTTNPLV* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1973 368 MobiDBLite consensus disorder prediction 30 46 - -
Ahy10g1973 368 MobiDBLite consensus disorder prediction 26 47 - -
Ahy10g1973 368 ProSitePatterns Zinc finger Dof-type signature. 70 106 IPR003851 GO:0003677|GO:0006355
Ahy10g1973 368 MobiDBLite consensus disorder prediction 113 147 - -
Ahy10g1973 368 MobiDBLite consensus disorder prediction 129 147 - -
Ahy10g1973 368 ProSiteProfiles Zinc finger Dof-type profile. 68 122 IPR003851 GO:0003677|GO:0006355
Ahy10g1973 368 PANTHER DOF ZINC FINGER PROTEIN DOF5.6-LIKE 31 360 - -
Ahy10g1973 368 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 31 360 IPR045174 GO:0003700|GO:0006355
Ahy10g1973 368 Pfam Dof domain, zinc finger 65 122 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1973 Ahy-Chr10 106112512 106114763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1973 1 229 C2C2-Dof Transcription Factor Family AT5G62940 43.952 1.03e-47 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy10g1973 zf-Dof 1.50E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1973 - - ahf:112784757 595.89