Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0302 ATGGGTTTGAGTTCTAAGCAGGTTTCAAGTACAGGACTTGATTGGAACAAGGCCTTGTTGCAATCATCACAAAACTTGGAGCTACCATCAAAGATTACTACTATGAAGAAACAACAACAACAAATTCAGAAGCAGCAACCAATATTAGAGCCTCTGAGGTGTCCAAGATGTGATTCAACAAACACAAAGTTTTGTTACTACAACAATTACAACAAGTCTCAGCCTCGCCATTTCTGTAGAGCTTGCAAGAGGCACTGGACTAAAGGTGGAACTCTCCGCAATGTTCCTGTTGGAGGTGGAAGAAAGAATAAGAGACCAACCAAGAAATCAACAACCACTACTTCTATTAGCACCACCACCACTACCACTGTTACCACCTTAAATGGTGGTGGTGGAAAAATGGAAGTTCAACCTCAGAGTAATCGTCCTCTTCCTCCTCCTCCTCCTCCTACTCTTTACCAATCTATGATTCGTCCACCACCTTTGCTACCACAACAGAATAATAATAATAATCTATCAGAAGTTAAGGACTTTGGTGGTAGTGGAATGTTTCTGAGTTCATCATCATCAGCTTTGAATCTTCCTCAGAGTCAAAGTCTAACCTTTCCCTTCTCAACAGCATCAAGTTCTAGTTTTGATGCAAACCCATGTTCAGTTTCAGCCTCCAATATTTATAGCTATGGTGGAGAAGAGTTTAAGACAATGGAGGAGACAACCATCAATGGTACTAACACACACCTATGGGAGATTCCATTACCTGCTACAACAACAAGTGTTGCTATGGAAATGCCTTCAAATTATTGGGGTTGGGAGGACCTTGATCCTTTGGTCTCAACTGATCTAAATGTTCCTTGGGATGATTCTGATATCAAACCTTGA 879 0.4107 MGLSSKQVSSTGLDWNKALLQSSQNLELPSKITTMKKQQQQIQKQQPILEPLRCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRPTKKSTTTTSISTTTTTTVTTLNGGGGKMEVQPQSNRPLPPPPPPTLYQSMIRPPPLLPQQNNNNNLSEVKDFGGSGMFLSSSSSALNLPQSQSLTFPFSTASSSSFDANPCSVSASNIYSYGGEEFKTMEETTINGTNTHLWEIPLPATTTSVAMEMPSNYWGWEDLDPLVSTDLNVPWDDSDIKP* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0302 292 ProSitePatterns Zinc finger Dof-type signature. 54 90 IPR003851 GO:0003677|GO:0006355
Ahy10g0302 292 Pfam Dof domain, zinc finger 52 104 IPR003851 GO:0003677|GO:0006355
Ahy10g0302 292 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 36 220 IPR045174 GO:0003700|GO:0006355
Ahy10g0302 292 MobiDBLite consensus disorder prediction 93 152 - -
Ahy10g0302 292 ProSiteProfiles Zinc finger Dof-type profile. 52 106 IPR003851 GO:0003677|GO:0006355
Ahy10g0302 292 MobiDBLite consensus disorder prediction 109 135 - -
Ahy10g0302 292 PANTHER OS06G0284500 PROTEIN 36 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0302 Ahy-Chr10 2721840 2723611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0302 14 119 C2C2-Dof Transcription Factor Family AT5G60200 52.212 1.15e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy10g0302 zf-Dof 4.90E-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0302 - - mtr:MTR_4g089095 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0485 20 4934903 4936681 Ahy10g0302 10 2721840 2723611 hybridization
Ahy13g3310 13 130076229 130078155 Ahy10g0302 10 2721840 2723611 PCT
Ahy3g3043 3 127504861 127506851 Ahy10g0302 10 2721840 2723611 PCT
Ahy10g0302 10 2721840 2723611 Ahy13g3310 13 130076229 130078155 PCT
Ahy10g0302 10 2721840 2723611 Ahy3g3043 3 127504861 127506851 PCT