Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0166 ATGGCCCAAGTGCAAGAAAATCATCAAGGGATCAAGCTCTTCGGAGCAACGATCACATTGGACGGTGGAGATTCAAAGGAGGGAAATAAGAAAGAAGAAGATCAAACGGTGGAGAAGAAGCCAGATAAGATCATAGCGTGTCCAAGGTGCAAGAGCATGGAAACCAAGTTCTGTTACTTCAACAACTACAACGTTAACCAACCAAGGCACTTCTGCAAGGGATGCCAGAGGTACTGGACCGCCGGCGGTGCTCTCCGAAACGTCCCCGTTGGCGCCGGTCGCCGTAAGGCCAACAAGCTGCCCTGCCGCGCCGCCGTTTCCGATGGTGCTTGCTTATACGATGAAACTTCCGATGATGTCCACAAGTTTGGGTTGGAGGAAGGGTTGCTTTTGGATAAGTGGAATGATGTTGCCGTCCCTCACGGTGATTTCCGGCAGCTTTTTCCGGCCAAGCGCCGGAGGTCCGCCTCAGCTCCGCATCAAGGTCAATGA 492 0.5285 MAQVQENHQGIKLFGATITLDGGDSKEGNKKEEDQTVEKKPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKANKLPCRAAVSDGACLYDETSDDVHKFGLEEGLLLDKWNDVAVPHGDFRQLFPAKRRRSASAPHQGQ* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0166 163 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 1 157 - -
Ahy10g0166 163 ProSitePatterns Zinc finger Dof-type signature. 47 83 IPR003851 GO:0003677|GO:0006355
Ahy10g0166 163 ProSiteProfiles Zinc finger Dof-type profile. 45 99 IPR003851 GO:0003677|GO:0006355
Ahy10g0166 163 PANTHER CYCLIC DOF FACTOR 2 1 157 IPR045174 GO:0003700|GO:0006355
Ahy10g0166 163 Pfam Dof domain, zinc finger 43 99 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0166 Ahy-Chr10 1601243 1602935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0166 6 157 C2C2-Dof Transcription Factor Family AT2G34140 54.762 5.11e-53 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy10g0166 zf-Dof 4.00E-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0166 - - vra:106779806 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0355 20 3697312 3699047 Ahy10g0166 10 1601243 1602935 hybridization