Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1878 ATGGATCCTTCTAGTGGACAACACCAGCAAATAATAATGTCAAGCCACCATCAGTCACTGGAGAACATGATAACATGTTCAAAAGCACAGCAGGAGCAGCAGCAACAGGAGAAGAAGGCAAGGCCACAGCCAGAGCAAGCTCTGAAGTGCCCAAGATGTGATTCCACCAACACCAAATTCTGTTACTACAACAACTACAGCCTGTCTCAGCCAAGGTACTTCTGCAAGTCCTGCAGGAGATACTGGACCAAAGGAGGAACACTCAGGAATGTTCCTGTTGGTGGTGGATGCAGGAAGAACAAGAGATCATCCTCATCCTCATCAACACCAACAGCAACAACATCAACTTCTTCATCTTCATCCTCAAAGAGGGGTCAGGATCATCATCATCATCAGGGATTATTCACACCCAATTCCAACCCACTCTCTGGATTATTCCCTCATCCTCATCTCTCCTATGATTCACCATCAAGTGACCTTACATTAGCATTAGCCAGGCTCCAAAAACAAACCTCATGTGGTGTTGGGCTTGGTTTTGATGACCACGATCTCTCAATTCTTGGCAACCCCACAAGCTCCCTCTGTGATATTCTTGGCAGCCACCACCACAACAATTCAACAAATATTAATGGAGGTGGATTCTTAGAGGCACTCAGAAGTGGTTTCCATCAAGGGACACAGAACAATAATAATAATAATCTGTTCTGTTCATATGGGAATGGGGACATGGGGGAAGTGGTGGACAATAATGGGAATTCCTCATATGGGGAGATGATGGTAGCTCCTAATAGCTATGATAATAATAATAATGATGAGATGAGCAATGCAGCAACACAAGCAGTGAGTGTGACTACTATGAAGCAGGAACTGTTGTGTAGTGGTGGCAGCAGGGAACAACAACACATGATGATGATGGGTAGCAGTACTGAGAGGGTGTTTGGGGGAATCCCATGGCATCACCTCAATGGAACTAATAATGGGGACACAAATATGATGTTGGGGGAACTTGATTCAGCAGCAGCAAGAGCAAGTTGGAATAATAATGGCTTCACTTCTTCTAATTGGCAAGGCCTTCTTCATAGTCCTCTAATGTAA 1095 0.4457 MDPSSGQHQQIIMSSHHQSLENMITCSKAQQEQQQQEKKARPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSSSTPTATTSTSSSSSSKRGQDHHHHQGLFTPNSNPLSGLFPHPHLSYDSPSSDLTLALARLQKQTSCGVGLGFDDHDLSILGNPTSSLCDILGSHHHNNSTNINGGGFLEALRSGFHQGTQNNNNNNLFCSYGNGDMGEVVDNNGNSSYGEMMVAPNSYDNNNNDEMSNAATQAVSVTTMKQELLCSGGSREQQHMMMMGSSTERVFGGIPWHHLNGTNNGDTNMMLGELDSAAARASWNNNGFTSSNWQGLLHSPLM* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1878 364 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 16 363 - -
Aev10g1878 364 MobiDBLite consensus disorder prediction 92 141 - -
Aev10g1878 364 Pfam Dof domain, zinc finger 46 102 IPR003851 GO:0003677|GO:0006355
Aev10g1878 364 MobiDBLite consensus disorder prediction 99 122 - -
Aev10g1878 364 ProSiteProfiles Zinc finger Dof-type profile. 48 102 IPR003851 GO:0003677|GO:0006355
Aev10g1878 364 ProSitePatterns Zinc finger Dof-type signature. 50 86 IPR003851 GO:0003677|GO:0006355
Aev10g1878 364 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 363 IPR045174 GO:0003700|GO:0006355
Aev10g1878 364 MobiDBLite consensus disorder prediction 27 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1878 Aev-Chr10 20334730 20336449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1878 46 364 C2C2-Dof Transcription Factor Family AT2G28510 38.110 2.13e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev10g1878 zf-Dof 8.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1878 - - aip:107612899 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1878 10 20334730 20336449 Aev10g1878 10 20334730 20336449 ECH
Aev10g1878 10 20334730 20336449 Aev04g3047 04 30212989 30214547 PCT