Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1822 ATGGTTTTCCCTTCTATTCGACTCTATTTAGATCCTCCCAATTGGCAACACCAGGACCCAAATCAACACTTACTTCAAGCAAATGGAAGCACCAATGAACAGAATTCAGCTCATCATATGCTTCCACCGCTACCGCCACAGGCACAAGACCCTCAAGTGGGCTCAATTATGGCCGGGTCCATGGCAGATCGGGCCCAAATAGCAAAGATACCGCCACCGGAGGCCACGCTGAAGTGCCCTCGGTGCGAATCCACCAACACAAAGTTTTGCTACTTCAACAACTACAGCCTCTCTCAGCCGCGGCACTTCTGCAAGACGTGCCGGCGTTACTGGACAAGGGGTGGCGCTCTAAGGAACGTTCCAGTGGGCGGAGGTTGCCGCAGGAGCAAGAAGAGCAAGAAGGGTCAGGGTCGGTCAAAGTCACCAGCTTCAGCAGCAGCACCCTCTAGTACTACAGAAAAGCACTCACTTCCGATTCATCACAATTCAGTGCCATCAAGTGCCACCTGTCAAGAGCTCATAGGCCGGTTCTCCTCGCAACAACCTAGGGGTTTCATGGCGTCTCTGCAGAATATAAGCCGTTATGGTAGTCCTGTGGGAAACATGGGACAGAACGAACTTATGGGGTTTCAGATTGGAGGAGGAGGAGTGGAACCGTGGCGGTTGAGCGGTTTTGAGTCAAGTAATGGAAATAACAATAATTGTGCTGCTTCGTACCCTTCTTTTCATCAAGGGGGTGGTTTGGTTGGGCTTGGAGATCATCATCAGATGGCGCCACCGGTTAAAGTGGAATTAGGCGGTGGAAATAATAATAATAATAATAATAATAATCTAAATTTGATGATGAGTGGGTCAGAGAGTAACCAATACTATTCATGGACTGATCATTTATCAGGCCTTGCTTCTTCTTCTGCTCATCTCTTGTGA 927 0.4887 MVFPSIRLYLDPPNWQHQDPNQHLLQANGSTNEQNSAHHMLPPLPPQAQDPQVGSIMAGSMADRAQIAKIPPPEATLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRSKKSKKGQGRSKSPASAAAPSSTTEKHSLPIHHNSVPSSATCQELIGRFSSQQPRGFMASLQNISRYGSPVGNMGQNELMGFQIGGGGVEPWRLSGFESSNGNNNNCAASYPSFHQGGGLVGLGDHHQMAPPVKVELGGGNNNNNNNNNLNLMMSGSESNQYYSWTDHLSGLASSSAHLL* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1822 308 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Aev10g1822 308 MobiDBLite consensus disorder prediction 121 162 - -
Aev10g1822 308 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677|GO:0006355
Aev10g1822 308 MobiDBLite consensus disorder prediction 17 48 - -
Aev10g1822 308 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 4 305 IPR045174 GO:0003700|GO:0006355
Aev10g1822 308 MobiDBLite consensus disorder prediction 17 38 - -
Aev10g1822 308 MobiDBLite consensus disorder prediction 138 162 - -
Aev10g1822 308 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Aev10g1822 308 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 4 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1822 Aev-Chr10 19994250 19995366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1822 1 133 C2C2-Dof Transcription Factor Family AT2G37590 57.823 2.34e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev10g1822 zf-Dof 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1822 - - gmx:100816635 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1822 10 19994250 19995366 Aev10g1822 10 19994250 19995366 ECH
Aev10g1822 10 19994250 19995366 Aev04g3129 04 30926066 30927391 PCT