Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1642 ATGGGACCCACAATCTTCACAGTGTCACCAGCGTGTGACTTTAACATTCCCACGGTGAGAATTGTTCCGCTCCAGCTGTCACTCGAGCACCTTCCACTCAGTGTTTATGCTATGCCACTCATGGGGTTGTGCCACGTGTTGCGGGTGACATTGGCTGTGTGCTGTGATGGGGTGACGAGTAGAGAAATGCAAGACCCAACAGCTTTCCAAACCCTCAAACCCCAATTTCCTGAACAAGAACAACTTAAATGCCCACGCTGTGACTCCACAAATACCAAATTCTGCTACTACAACAACTACAACCTCTCACAGCCACGCCATTTTTGCAAGAATTGCAGAAGGTATTGGACAAAAGGAGGTGCTCTTAGGAACATCCCTGTTGGTGGTGGAAGCAGGAAGAACACTAAAAGATCATCCACAGGCTCCAAACGCCCTGCATCATCATCTTCCCCAACACCATCAGTTTCCACTGCACCAGCACCAGCACCACCACAGGCTCCATCATCAGCTCCAGAGCCTGACCCGGCTCGGGCTTACCCCGGTCCGGTTAACGTTGGTGGAGGTTTCAATTCCCTTCTAGCATCAACTGGTCATTTGGGGAGCCTCTTGGAGGGCCTAAATTCAAGTGGATCAAATCTAAAAATGGTACAGATGAATGAATTTGGTGTGAGTGCCACCAGTTCTGGCCCTCCGGCCAGTTCGGATCCCGGGAGGACTCCCGGGTTGAATATCCAGAGCAATGGCAGTGCAGAGATCTTTCTGAGTATGCAGAATGGTGATTCAAGCTGTTGGAATGGTAGCAGTGGGTGGTCTAACCTTGCAATATAA 828 0.5012 MGPTIFTVSPACDFNIPTVRIVPLQLSLEHLPLSVYAMPLMGLCHVLRVTLAVCCDGVTSREMQDPTAFQTLKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKRSSTGSKRPASSSSPTPSVSTAPAPAPPQAPSSAPEPDPARAYPGPVNVGGGFNSLLASTGHLGSLLEGLNSSGSNLKMVQMNEFGVSATSSGPPASSDPGRTPGLNIQSNGSAEIFLSMQNGDSSCWNGSSGWSNLAI* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1642 275 MobiDBLite consensus disorder prediction 156 178 - -
Aev10g1642 275 ProSiteProfiles Zinc finger Dof-type profile. 82 136 IPR003851 GO:0003677|GO:0006355
Aev10g1642 275 MobiDBLite consensus disorder prediction 223 245 - -
Aev10g1642 275 MobiDBLite consensus disorder prediction 131 155 - -
Aev10g1642 275 ProSitePatterns Zinc finger Dof-type signature. 84 120 IPR003851 GO:0003677|GO:0006355
Aev10g1642 275 PANTHER DOF ZINC FINGER PROTEIN DOF3.1-LIKE 64 275 - -
Aev10g1642 275 MobiDBLite consensus disorder prediction 123 182 - -
Aev10g1642 275 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 64 275 IPR045174 GO:0003700|GO:0006355
Aev10g1642 275 Pfam Dof domain, zinc finger 80 136 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1642 Aev-Chr10 18903419 18906245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1642 67 203 C2C2-Dof Transcription Factor Family AT1G51700 52.667 2.45e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev10g1642 zf-Dof 3.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1642 - - gmx:100798927 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1642 10 18903419 18906245 Aev10g1642 10 18903419 18906245 ECH
Aev10g1642 10 18903419 18906245 Aev09g0547 09 4898396 4899118 PCT