Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1376 ATGATCTATGGCACTCGTATAATAGCTTCTAAATCACTAAATTTCAGAGCACTAGTGTTGCGGAAATCATTAAATTTTCAAGTTAGATTCTCCTCAAATTTTTCTCTTAGGAAGTTAAGAATGGAAGGTAATCTTAATTATAGCACTGAGGGCAACAGAAAAGAATCTAGAGGTGCCTTGGTTGTTCTAGAAGGCTTGGATCGTTCGGGGAAGTCTTCTCAGTGTAGCAGACTAGTCTCTTACTTCGAGGGACAAGGGATCTCTGCTGAACTCTGGCAATTTCCCGATAGAACCACGGATGTCGGAAAAATGATTTCTGCCTATCTTACTAACACGTCGCAATTGGATGATCGCACAATTCATCTCCTCTTCAGTGCTAATAGATGGGAGAAGAGGTCATTGATGGAAACTAAATTGAAAACTGGAACAACCCTCATTGTTGACCGATATTCTTATTCCGGGGTGGCTTTCTCGTCTGCCAAGGGACTAGATATTGAGTGGTGTAAGGCGCCAGAGGTTGGGCTGCTTGCTCCAGATCTGGTAGCATACCTTGACATATCACCAGAGAAAGCTGCAGAAAGAGGAGGGTATGGAGGTGAGAGATATGAAAAGCTGGAGTTTCAGAAGAAAGTTGCTGAAAGTTACAAAGTTCTTCATGATGCCTCCTGGAAGATTGTAGATGCTTGCCAACCCATTGAAGATATTGAGAAACAGTTGCAAGAGATAGTCCTTGATTGTGTCAGAGTGTGTCAGAAAGGGAAACCCCTATCCTCCTTAAGGAACGTTTCTTCTTCTTCTTCTTCTTCACTCTTGATGGACCCTGACGTCGTTGAAATCTCTCCTCCTCCCCCAATTCGCCACAATCCCAGATTGGTCAAGCAAACACTGGATGTGATTGACATTGATGATGATGATGACTCTGCGGATTTAATGATAATTGGTGAAAACCTTGGTAAAAGTAACAAGGGGAAGACAATTGAAGCAGTTCATGATGGTTATAACAATCTTCAAGCTGTGGAAATGTCTGATTCTAATTTTGGTCTGCCTGGTGCGGAAAATTTTGGACCAGTTAGTGGGATTGAGTCTTCTAGTGGTTATCCTTCAGTATCACATAACTTAACAGGTGTTGATGGTCATGTTTCAGAAGATTATGCAGAAGTAGATGATGACTACATTGATCTTTTTTCAGAAGATTATGGAGAAATAGATGAGTATGCTTTATTACAGGCACAATTTGATAATGTTGATATACCCACTGGAGTCGAAGCTTCTTTTGCTTGGTTGCCAGCAGACTATGGCGTAGGTTCAAAGCCGACTGGAAATAGTTCATTGTACCCATGGTGTTTTCCTCAATCAGCTGGTAAAAGTTCTCATCTGACAGACTTACCTCAGCCTTCGTGGTCAGTAGAGTCTACTAACCCTAAACTCGTAGGATCATCAGCGGGTGGTTCTAATTTGCAAATCAAGACGGGTGATATTGCTCACTCTTCTGGAATGGAATCTTCTTCTCATCCGTTAGTAATGTCTCAAGCTCTTCTTAGTAAGAAGAAATCAGCAGCATCGCAACGTAGAGGGCGTGATTTGAGTACTTCATTAGGAGTCAAGTCATCCAAGTCTCAGAGGTTTTCAGAACCTCTCCATAGTAAAAAGAAGCCTGCTATTTTTGATGCTTCAAGTAACCATGGTTTTGTAGCCAATTCAGCGGCTATGAAGCTGCCACCTGCAGGTGAGCCGCTATTTTGGGAGAAATTTATAAGTGCCAAGAAGGCAGCTGGTAGCAGTAGCAGTAGCAGTTGGTACTCACCATTTGTTGTACCATTCCATCCTTCAGGAGTAGAATTAGAAAACCCATGGTGGAAGAATTCTCAGAACTTCAAGCCAATTTTTCCTAATCACACAGCTAATTCAACTGTTCATGTCCCGTTAGAGTTTCTTCATGCTCCTCCGGGGCACATGCATGATAACTTCTCGGCTCACCATTCTGCCAGAGATGGGAATAATGAAGCTGCGCCAGTTGTGCCAATCTCCGACGAAGACAGAGAGGAAATGCTCAGGAATTTCCAAAGTTTTAAACAATTTGACACTGTTGAAGACGCTTCAGATCATTACTTTGCCGGCTATAATTCTTCCATGAAGCAGCATCCGAAGAATTGGGCCAAAAAAATCCAGGAAGAGTGGAAGATTTTGGAGAAGGATTTGCCAGATACAATATTTGTCCGGGTTTATGAATCAAGAATAGATCTTTTGAGGGCTGTGATTATTGGAGCAGAGGGGACTCCTTATCATGATGGCCTGTTCTTTTTCGATGTTTTCTTCCCCAGTGGCTATCCTAATGTGCCCCCGCAAGTTCACTACCACTCAGGAGGTCTTCGTCTTAACCCCAATTTGTATAATTGTGGCAAAGTATGCCTTAGTCTACTCAACACCTGGTCTGGCAGCAAGAACGAGAAGTGGCTTCCAGGCGTTTCAACGATTCTACAGGTTCTAGTCTCCATACAAGGTCTGATCTTGAATACAAAGCCTTACTTTAATGAACCTGGATTTGCACGCACGAGTGGCTCATTAAATGGTGAAAAGAAATCCCTTCAGTATAATGAGGACACATTCATCCTATCATTGAGGACAATGATGTATATGATGAGAAGGCCTCCGAAGAATTTCGAGAACTTTGTCGCAGGGCATTTCTGCACCCGAGCTCACGATATTCTAGTAGCATGTAAAGCTTACATGGAAGGTGCCCAAGTTGGCTGTTTGGTCAAAGGTGGAGTTCAGGATGTTGATGAGGGTGACAAAAGCTGCTCAAAGCAGTTCAAAGATTCTTTAACTGGATATGTGAATATGCTTGTCAAGGAGTTTGCACAAATTGGAGCTAAGGACTGTGAGAAATTCCTGTGTCCAGGAACAACAATGAACAAGCCATTGGCACAAAATGGCACAGAATTGAGTGGATTGCCTCAGGCTGCCACTTGA 2970 0.4273 MIYGTRIIASKSLNFRALVLRKSLNFQVRFSSNFSLRKLRMEGNLNYSTEGNRKESRGALVVLEGLDRSGKSSQCSRLVSYFEGQGISAELWQFPDRTTDVGKMISAYLTNTSQLDDRTIHLLFSANRWEKRSLMETKLKTGTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEVGLLAPDLVAYLDISPEKAAERGGYGGERYEKLEFQKKVAESYKVLHDASWKIVDACQPIEDIEKQLQEIVLDCVRVCQKGKPLSSLRNVSSSSSSSLLMDPDVVEISPPPPIRHNPRLVKQTLDVIDIDDDDDSADLMIIGENLGKSNKGKTIEAVHDGYNNLQAVEMSDSNFGLPGAENFGPVSGIESSSGYPSVSHNLTGVDGHVSEDYAEVDDDYIDLFSEDYGEIDEYALLQAQFDNVDIPTGVEASFAWLPADYGVGSKPTGNSSLYPWCFPQSAGKSSHLTDLPQPSWSVESTNPKLVGSSAGGSNLQIKTGDIAHSSGMESSSHPLVMSQALLSKKKSAASQRRGRDLSTSLGVKSSKSQRFSEPLHSKKKPAIFDASSNHGFVANSAAMKLPPAGEPLFWEKFISAKKAAGSSSSSSWYSPFVVPFHPSGVELENPWWKNSQNFKPIFPNHTANSTVHVPLEFLHAPPGHMHDNFSAHHSARDGNNEAAPVVPISDEDREEMLRNFQSFKQFDTVEDASDHYFAGYNSSMKQHPKNWAKKIQEEWKILEKDLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPPQVHYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILNTKPYFNEPGFARTSGSLNGEKKSLQYNEDTFILSLRTMMYMMRRPPKNFENFVAGHFCTRAHDILVACKAYMEGAQVGCLVKGGVQDVDEGDKSCSKQFKDSLTGYVNMLVKEFAQIGAKDCEKFLCPGTTMNKPLAQNGTELSGLPQAAT* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1376 989 MobiDBLite consensus disorder prediction 524 541 - -
Aev10g1376 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 248 IPR027417 -
Aev10g1376 989 ProSitePatterns Thymidylate kinase signature. 146 158 IPR018095 GO:0004798|GO:0005524|GO:0006233
Aev10g1376 989 Gene3D - 51 260 IPR027417 -
Aev10g1376 989 SUPERFAMILY UBC-like 706 884 IPR016135 -
Aev10g1376 989 CDD UBCc 720 846 IPR000608 -
Aev10g1376 989 MobiDBLite consensus disorder prediction 459 489 - -
Aev10g1376 989 CDD TMPK 60 245 - -
Aev10g1376 989 Pfam Thymidylate kinase 63 238 IPR039430 -
Aev10g1376 989 Gene3D Ubiquitin Conjugating Enzyme 676 958 IPR016135 -
Aev10g1376 989 Hamap Thymidylate kinase [tmk]. 59 247 IPR018094 GO:0004798|GO:0005524|GO:0006233
Aev10g1376 989 Pfam Ubiquitin-conjugating enzyme 722 852 IPR000608 -
Aev10g1376 989 SMART ubc_7 720 877 - -
Aev10g1376 989 MobiDBLite consensus disorder prediction 514 549 - -
Aev10g1376 989 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 295 965 - -
Aev10g1376 989 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 717 877 IPR000608 -
Aev10g1376 989 TIGRFAM DTMP_kinase: dTMP kinase 57 238 IPR018094 GO:0004798|GO:0005524|GO:0006233
Aev10g1376 989 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED 295 965 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1376 Aev-Chr10 17173003 17181625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1376 685 966 Miscellaneous Gene Families AT2G33770 51.408 1.34e-85 293