Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1244 ATGAAGATTCAGTGCAACGTGTGTGAGGGTGCTGAAGCGAAGGTTCTGTGCTGTGCTGATGAGGCAGCGCTGTGTTGGGAGTGTGATGAAAAGGTTCATGCTGCTAATAAGCTTGCAAGCAAGCACCAGAGGGTTCCACTTTCCATGTCTTCTTCTCATATGCCCAAATGTGATATTTGTCAGGAAGCATTTGGCTATTTCTTCTGTCTAGAGGATCGAGCTTTACTATGCAGAAAATGTGATTTGGCAATACACACTGCAAATTCTTATGTCTCAGGCCATCAAAGGTTTCTTCTCACTGGTGTGAGAGTAGGTCTTGAAGCAACTGAGCCTGGTGCTTCCTCAACTTCTCTGAAGTCAGATTCTGGGGAGAAGGTTTCTGATACAAAATCTTCATCTGTCTCTAGAAAGGTTTCTACGATGCCGGATTACAATGAAGCATTACCCATTGAACTTGGGGGAGTTGGGGAGTTACCACCAGCTAAGGTGTCTTATGGTGGTGGTTCTACGGCCGGAAACATCTCGCAGTGGCAGATGGATGAATTCCTTGGCCTTAATGATTTCAGTCAGAATTATAATTACATGGAAGGATCATCAAAGCCTGACAGTGGTAAGCTTGGGGATTCTGATTCTCCTGTTTTAAGATCAAGTGAAGAGGAAATGGAGGACGATGACTACTTGGGGCGCGTTCCGGATTCGTCCTGGACAGTCCCTCAGATCCCTTCTCCTCCAACAGCTTCAGGATTATACTGGCCAAAAGACCCTCATTGTTCATCTGATAATGCTATGTTTGTTCCTGACATATGCTATTCTCCCATGCAACAGAGTCGGAGTAGTACCCTTCTATCAAGAAGGAGGAGGCACCTTTAA 870 0.454 MKIQCNVCEGAEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLSMSSSHMPKCDICQEAFGYFFCLEDRALLCRKCDLAIHTANSYVSGHQRFLLTGVRVGLEATEPGASSTSLKSDSGEKVSDTKSSSVSRKVSTMPDYNEALPIELGGVGELPPAKVSYGGGSTAGNISQWQMDEFLGLNDFSQNYNYMEGSSKPDSGKLGDSDSPVLRSSEEEMEDDDYLGRVPDSSWTVPQIPSPPTASGLYWPKDPHCSSDNAMFVPDICYSPMQQSRSSTLLSRRRRHL* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1244 289 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Aev10g1244 289 PANTHER B-BOX ZINC FINGER PROTEIN 18 1 287 - -
Aev10g1244 289 MobiDBLite consensus disorder prediction 110 138 - -
Aev10g1244 289 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Aev10g1244 289 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 287 - -
Aev10g1244 289 Gene3D Classic Zinc Finger 1 92 - -
Aev10g1244 289 CDD Bbox1_BBX-like 5 47 - -
Aev10g1244 289 SMART bboxneu5 4 47 IPR000315 GO:0008270
Aev10g1244 289 SMART bboxneu5 52 99 IPR000315 GO:0008270
Aev10g1244 289 CDD Bbox1_BBX-like 56 99 - -
Aev10g1244 289 Pfam B-box zinc finger 54 95 IPR000315 GO:0008270
Aev10g1244 289 Pfam B-box zinc finger 4 47 IPR000315 GO:0008270
Aev10g1244 289 MobiDBLite consensus disorder prediction 194 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1244 Aev-Chr10 16084713 16086826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1244 1 289 C2C2-CO-like Transcription Factor Family AT1G78600 50.462 8.83e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Aev10g1244 zf-B_box 1e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1244 10 16084713 16086826 Aev10g1244 10 16084713 16086826 ECH