Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1161 ATGTTAATATATCAATACTTAGTGAAGAAGGCGCTAGAAGAAGAAAAAAAAAGGGAGAAAAAAAAATCTGAAAAGAACTCAATTGAGAGAGAGAGAGAGAGCTCTCGCGCGCGCGATGCGATTGCGGTGCTCACTGCTCACCACTTCTTCTTCCTCCTCGACGGCGGCGCCGTCCAATGCACCGGCGGCGAGTTCATCCGTTCGCCGTCACCACTGCCGTTGATGGCCCTGCAGATGACGTGGCAACCGAACCTCCTCAGCCAGAAGCGCAAGACCGGTCCTCCCTTAGGTCTCCGCAACCTCGGCAACTCCTGCTACCTCAACAGCGTCCTCCAGTGCCTCACCTACACTCCTCCTCTCGCCAATTTCTGCCTCCGTTTTCAACACTCTTCTCTCTGTGATTCCTCGGCGAATTGCCCGTTCTGTATTCTTGAGAAGCAGATTGCGCGGTCCCTGCGCGTGGATCTCGTTCACGACGCGCCGTCGAAGATCCAGAGCTGCCTCCGGATCTTCGCGGAGCATTTCCGGTGCGGGCGGCAGGAGGACGCGCACGAGTTCCTCCGGTACGTGATTGACGCCTGCCATAATACTTGCCTCCGGCTCAAGAAGCTCCGCCGCAAGGGCGGCGGAGGCGGAGGAGGGGACGACGGCGGAAGCAGTACGGTGGTGAAGGAGATATTCGGAGGGGCCCTGCAGAGCCAGGTGAAGTGCCTGTGCTGTGGTTACGAGTCTAATAAGGTTGATGAGATTATGGATATTAGCCTTGATGTTTTTCATAGTAACTCGCTTAGAGATTCGATGCAAAAGTTCTTCCAGCCTGAGGTTTTGGATGGGAACAATAAGTACAAGTGTGATAGTTGTAAGAAGTTGGTGCCGGCTAAGAAGCAAATGAGTATACTTCAAGCACCTAATATTCTTGTGATACAGCTCAAGAGATTTGAGGGCATATTGGGTGGGAAGATTGATAAGGCTGTTGCATTTGAAGAAGTTTTGGTGCTCTCTAAATTCATGTGCAAAGCGAGCCAGGATCCGCTCCCAGAATATAAGCTCTTTGGAACTATTGTGCATTCAGGCTACTCCCCAGAATCTGGTCACTATTATGCTTACATAAAGGATGCAATGGGTCGGTGGTATTGTTGTGATGATTCTTGTGTAACAGTTGCAACTTTGCAAGAAGTTTTGTCAGAAAAGGTTTACATTCTATTTTTCTCTCGAACTAACCAAAGACCAACGTCAGTTAGTAATTCTCTTGCGTCAAATGGTGTAAAGCTGCCTCATTCCAAATCCAATGGGAGCCAGACATCTGAGTGTCCAAAGGTTGATGTACCACTGAAAGCAGTGCATCCAAAATCAAACTCTGAGCAATCTGCTTGGAAGGATATGCCAAGGGTGTCTAAGATTAGTAAAGGGCCTTCCAGCCCACGAGTGAAGTTTGACATCAATGGAAGTTCTACTTCCAAGAGAAGTCCTGCTCCAGCAAATGTCAATGGGAAAGTTGACAGTTCTAAGAATCAGGCTGTGGTAAATGGGCATGTGAAGGACACATTTCCTTTTGAGAATGGTAAGAAAGACCCTTCATTATTTCCAACCGGGAATGGCTCTGAGAAAAATAAAGTTAACGTTGCTGACAAATCGAAAGGAAAGGATTCGACATTAACTAACGGACACACTGATATTCACTCAGTTGATATTCGTTCTGCAAAATCGGATCCTGCAGAAGACACTGATAGAAGCAGGGTTATAACGGGTAGGGGACCTGACAAGTTAAAGCAAGAAAGCAATGGCCACAGTGAGCCTAAGATATTGGGAAAGAGAAAGATGCAGGAGGCTACAAGTATTTTGCTTGCTCATGATGATCAGTCTCAAACAAGGGTTGAAGAATTCAAGGACATTCTTGGCAATGAAGCGAAGTCTGTTTTGAAGTCATGTGGCTGGGCAGATAAAGTCTATGATTTCATGCGTTCTAGAAAGAGGATACGGGCACAAGAAGCTGGACATGCAGCAAGTGGAGATGAAATAAGAAAGTTGTTAATAGGAGATGCTAAGGGAGCTTTCTTATCAAAGATTCCTGAGTCATTGAGAAAGGATCTGATTGAACGTCTCCGTTTGTTTAGCCAAGAAAAAGTACAATTTGAACATCCTTGA 2145 0.4681 MLIYQYLVKKALEEEKKREKKKSEKNSIERERESSRARDAIAVLTAHHFFFLLDGGAVQCTGGEFIRSPSPLPLMALQMTWQPNLLSQKRKTGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRFQHSSLCDSSANCPFCILEKQIARSLRVDLVHDAPSKIQSCLRIFAEHFRCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGGGGGDDGGSSTVVKEIFGGALQSQVKCLCCGYESNKVDEIMDISLDVFHSNSLRDSMQKFFQPEVLDGNNKYKCDSCKKLVPAKKQMSILQAPNILVIQLKRFEGILGGKIDKAVAFEEVLVLSKFMCKASQDPLPEYKLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEKVYILFFSRTNQRPTSVSNSLASNGVKLPHSKSNGSQTSECPKVDVPLKAVHPKSNSEQSAWKDMPRVSKISKGPSSPRVKFDINGSSTSKRSPAPANVNGKVDSSKNQAVVNGHVKDTFPFENGKKDPSLFPTGNGSEKNKVNVADKSKGKDSTLTNGHTDIHSVDIRSAKSDPAEDTDRSRVITGRGPDKLKQESNGHSEPKILGKRKMQEATSILLAHDDQSQTRVEEFKDILGNEAKSVLKSCGWADKVYDFMRSRKRIRAQEAGHAASGDEIRKLLIGDAKGAFLSKIPESLRKDLIERLRLFSQEKVQFEHP* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1161 714 MobiDBLite consensus disorder prediction 539 553 - -
Aev10g1161 714 SUPERFAMILY Cysteine proteinases 89 405 IPR038765 -
Aev10g1161 714 MobiDBLite consensus disorder prediction 561 600 - -
Aev10g1161 714 CDD Peptidase_C19E 95 404 - -
Aev10g1161 714 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 62 639 - -
Aev10g1161 714 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 96 406 IPR028889 -
Aev10g1161 714 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 348 366 IPR018200 GO:0004843|GO:0006511
Aev10g1161 714 Pfam Ubiquitin carboxyl-terminal hydrolase 97 403 IPR001394 GO:0004843|GO:0016579
Aev10g1161 714 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 97 112 IPR018200 GO:0004843|GO:0006511
Aev10g1161 714 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 19 62 639 - -
Aev10g1161 714 Coils Coil 9 38 - -
Aev10g1161 714 MobiDBLite consensus disorder prediction 410 437 - -
Aev10g1161 714 Gene3D Cysteine proteinases 80 407 - -
Aev10g1161 714 MobiDBLite consensus disorder prediction 410 600 - -
Aev10g1161 714 MobiDBLite consensus disorder prediction 477 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1161 Aev-Chr10 15343491 15349158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1161 95 527 Miscellaneous Gene Families AT2G24640 34.240 2.72e-61 212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1161 10 15343491 15349158 Aev10g1161 10 15343491 15349158 ECH