Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1116 ATGGCCGTTGAGGCTCGCCATCTCAATCTCTTCCCTTCTCAGCTCATTGGCAACAGGGAAATGATGATGAACCCAATTGATTCAAACATGAATCTCTACAACACCCAGATGGGTTACTCTCTGCTTCCGTCATCCGGCACCACCACCGCCACCGCCGGCGCCGGAATGGAGGCCCTGCTCCCACCGGTGGCTTACAATTCCTTCATTACTGATTCCCTGCCTCAGAAACATGCAATCAAATCAGAAAGCACCCTTACCTACAACAACAACGTTGCCTTATCAAGAAAGCGTTCAAGGGAAACCTCAAGCTCCATTAATTATCCTTACCCCTCTTCCTACACATCAGTTCAACCCCTCAACACCAAAAATTGCGGCTCTTTCACCTTCTTAGGTGAAGACATTAGTATTCAGATCCAGCAGCAACAACTAGACATCGACCAACTAATTGCACAGCGAATGGAGAAGGTGAGAGCTGAACTAGAAGAGAAACGCAAGAGGCAAGCGAGGAGGATCATGGAGTTAATTGAAGTGGGGGTGATGAAGAGATTGAAGGCCAAAGAGGAGGAAATAGAGAAGATTGGAAAACTCAATTGGGCTCTGGAAGAGAAAGTGAAGTCCCTGTGCATCGAGAATCAGATATGGCGTGACTTAGCACAAACCAACGAGGCCACAGCCAATGCTCTCAGGACAAACCTCGAGCAGGTCCTGGCTCAGCGCGGTTCCGCCGCTGTGGATGACGACGGCGCCACCGTGTGCCCCGCAGCGATGGACGATGCAGAGTCATGCTGCGGCAGCAGTGATGAGTGCGATGACAAAAAGTTGGAAGAAAACGTGGTGGAACAGGGGTGGCGCACGATAGCAGGGTGCACAGGAGGTGCGCAGGATAAGGATGGTGGTTGTGGGAAGAGATTGTGCAAGAACTGTGGGAAAGATGAGTCGTGCGTGCTGATTTTGCCTTGCAGGCACCTCTGCTTGTGTACTGTGTGTGGGTCTACCCTTCACACTTGTCCTGTATGTAAATCCTTCAAAACTGCTAGTGTTCATGTTAACATGTCCTAA 1059 0.5024 MAVEARHLNLFPSQLIGNREMMMNPIDSNMNLYNTQMGYSLLPSSGTTTATAGAGMEALLPPVAYNSFITDSLPQKHAIKSESTLTYNNNVALSRKRSRETSSSINYPYPSSYTSVQPLNTKNCGSFTFLGEDISIQIQQQQLDIDQLIAQRMEKVRAELEEKRKRQARRIMELIEVGVMKRLKAKEEEIEKIGKLNWALEEKVKSLCIENQIWRDLAQTNEATANALRTNLEQVLAQRGSAAVDDDGATVCPAAMDDAESCCGSSDECDDKKLEENVVEQGWRTIAGCTGGAQDKDGGCGKRLCKNCGKDESCVLILPCRHLCLCTVCGSTLHTCPVCKSFKTASVHVNMS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1116 352 PIRSF SBP1_RNase_bind 1 352 IPR017066 -
Aev10g1116 352 Coils Coil 150 177 - -
Aev10g1116 352 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 351 - -
Aev10g1116 352 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 293 352 IPR013083 -
Aev10g1116 352 Pfam Zinc finger, C3HC4 type (RING finger) 302 341 - -
Aev10g1116 352 Coils Coil 183 203 - -
Aev10g1116 352 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 351 IPR017066 -
Aev10g1116 352 ProSiteProfiles Zinc finger RING-type profile. 305 340 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1116 Aev-Chr10 14912442 14913858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1116 297 341 Miscellaneous Gene Families AT4G39050 35.556 9.03e-07 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1116 10 14912442 14913858 Aev10g1116 10 14912442 14913858 ECH