Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1105 ATGGGAGTTAACAATAGTGATAATGAAGATTTGGTAATAATGAAGGAAGATGAATTTGAAGTTGAAGGTGATGATGTTCCTCTTCCAGGGTTTCGGTTTCACCCAACAGATGAAGAGCTTGTTAGTTTCTATCTTAGGAGGAAGCTTGATAACAAACCAATCACTATTGAACTCATCAAGCAGATTGATATCTATAAATATGATCCTTGGGATCTTCCAAGAGCAAGTGGAACAGGAGGGGAGAAAGAAGGGTATTTCTTTTGCAAAAGAGGGAGGAAGTATAGGAACAGCATAAGGCCAAACAGAGTGACAGGGTCAGGGTTCTGGAAGGCGACTGGGATAGACAAGCCTGTTTACTCTCATGGCGGAGAGGGCAATGACTGCATTGGCCTCAAGAAAACTTTGGTGTACTACCGAGGCAGTGCTGGCAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGACTTCCCTCATCATCCAATACTACTACTACTAATACTAATCTTCATCATCATCATCATGCTGATCTTGCACTTCAAGAAGCTGAAATATGGACATTGTGTAGAATATTCAAGAGAAATGTGTCACCAAGAAAGCACACAGCAGAGATGATGATGAGATCATCATCAACAACAACTAAGAGTAGTACTACTCATAACAACAAGATGAGTAGTAAGATAATAAGCAGTGTGGATTATTGTAACATCAAGAACAACCACGAATCATACATAAACTTTGGTGGTTCAAACCTATTTGGCCATCACCATCATCAAAATGAGGAGCAGAAGCCACTGATTCTTAATAACTACAACACCAACAACCACCCTCTATTAGTGCCACAACAATCCCAGCAACAACATCAAGTACAAATAATCACATCACCACCATTATTATCTTCTAATAATAATAATAATAATAATAATTTCTGGATTAATAATAACCATCATCATGCTCATGCTGCTGCTGCTACCAATTACAGCGACTTATTCACATTTGAGAACTGGGATGAGCTTGGATCAGTTGTCAAGTTCGCTGTTGATTCGCCTAGTTTGTAA 1059 0.3919 MGVNNSDNEDLVIMKEDEFEVEGDDVPLPGFRFHPTDEELVSFYLRRKLDNKPITIELIKQIDIYKYDPWDLPRASGTGGEKEGYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSHGGEGNDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSSSNTTTTNTNLHHHHHADLALQEAEIWTLCRIFKRNVSPRKHTAEMMMRSSSTTTKSSTTHNNKMSSKIISSVDYCNIKNNHESYINFGGSNLFGHHHHQNEEQKPLILNNYNTNNHPLLVPQQSQQQHQVQIITSPPLLSSNNNNNNNNFWINNNHHHAHAAAATNYSDLFTFENWDELGSVVKFAVDSPSL* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1105 352 MobiDBLite consensus disorder prediction 204 222 - -
Aev10g1105 352 Pfam No apical meristem (NAM) protein 29 157 IPR003441 GO:0003677|GO:0006355
Aev10g1105 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 315 - -
Aev10g1105 352 PANTHER CONTAINING PROTEIN 9, PUTATIVE, EXPRESSED-RELATED 8 315 - -
Aev10g1105 352 Gene3D NAC domain 36 200 IPR036093 GO:0003677|GO:0006355
Aev10g1105 352 ProSiteProfiles NAC domain profile. 27 194 IPR003441 GO:0003677|GO:0006355
Aev10g1105 352 SUPERFAMILY NAC domain 27 194 IPR036093 GO:0003677|GO:0006355
Aev10g1105 352 MobiDBLite consensus disorder prediction 200 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1105 Aev-Chr10 14824712 14827260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1105 24 225 NAC Transcription Factor Family AT1G26870 57.143 3.43e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev10g1105 NAM 3.5e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1105 10 14824712 14827260 Aev10g1105 10 14824712 14827260 ECH