Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1103 ATGAAGGAGGGTGGTAGAAAACAAGGTGCAATGTCACCATGTGCAGCATGCAAGCTTCTTAGAAGGAGATGTGCAAAGGATTGTGTGTTTGCTCCTTATTTCCCTGCTGATGAGCCTCACAAATTTGGTAGTGTTCATAAAGTTTTTGGGGCTAGCAATGTCAACAAGATGTTACAGGAATTACCTGAACACCAAAGAAGTGATGCAGTTAGCTCAATGGTATATGAAGCGAATGCACGAGTGAGAGATCCTGTTTATGGATGTGTTGGTGCCATATCCTCTCTTCAGCAACAAGTTGATGAGCTCCAAACCCAATTGGCATTAGCCCAAGCTGAAGTTGTGCACATGAGATCAATGCGCCAATTCTCACCACCACCCTCATCATCAAATCACCATCACCACCAACCATCAATTATTCCTCCTTCATCATCAACTACTTCATTATCACCCGATCAGAATTTGTGCCAATCAAGCAGGACCCTCTCTTCTTCACACACCAACAAGTCCCTTTTTGCCATCGACATGATGGTCCTTGATCAAGCCAACTTGGGCCAATCCTTGTGGTCGTGTTAG 573 0.445 MKEGGRKQGAMSPCAACKLLRRRCAKDCVFAPYFPADEPHKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDELQTQLALAQAEVVHMRSMRQFSPPPSSSNHHHHQPSIIPPSSSTTSLSPDQNLCQSSRTLSSSHTNKSLFAIDMMVLDQANLGQSLWSC* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1103 190 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Aev10g1103 190 Coils Coil 92 119 - -
Aev10g1103 190 MobiDBLite consensus disorder prediction 121 160 - -
Aev10g1103 190 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Aev10g1103 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 157 - -
Aev10g1103 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 157 - -
Aev10g1103 190 MobiDBLite consensus disorder prediction 120 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1103 Aev-Chr10 14786779 14791612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1103 1 190 AS2 family AT1G31320 62.626 3.98e-70 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev10g1103 LOB 2.2e-43 No_clan