Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0862 ATGGGAAATCTCCTGGCTAGAAACAAAAATAAAAAGAGTGGCCAAAATTCAAGAAATCCTGGGAGAACCCCTTCCTCCATAAGAAGCAGAATTGTGTTACCACCACACTTAGCTTTTCCACCACAACCTCCACAGTTTCCATCATCACAGGCGGAGCCGCAGCAGCCGCAGCCGCCGCAACGAGCCCAATCAATTTCTAGGAGACCAAGTTTTGGGAAAAATAGTATGAATAATAATTCAGGACAAGGCTCAGTTGCCATGGGAAACAAGCAATTAGTAACAAAGAAATATGCTTTGATTACTGATAACTTCACAACCCTTGAACAGGTTCAAATGGCCTTGAAGAAAGAAGGTCTAGAATCATCCAATCTCATCCTTGGAATTGATTTCACAAAGAGTAATGAATGGACCGGCAAAATCTCATTCAACAATAGAAGCTTGCATGCTATTGGAGATACACCAAACCCTTATGAGAAAGCAATCTCAATTATTGGCAAGACTTTGGCTCCCTTTGATGATGATAACCTGATTCCATGTTTTGGATTTGGTGATGCTACAACCCATGATCAAGAAGTGTTTAGCTTTCATGGTGATCATTCACCTTGTCATGGCTTTGAGGAAGTTTTGGAATGCTACCAAAAAATTGTTCCAAACTTGAAACTTTCAGGACCAACTTCTTATGCTCCAGTGATGGAAGCTGCAATAGACATTGTAGAGAAAAATCGTGGCCAATTTCATGTGTTAGTTATCATTGCAGATGGCCAGGTTACTAGAAGTGTTAACACTGAAGATGGAGAACTAAGTTCTCAAGAAGAGAAGACAATCAAAGCAATTGTTGATGCAAGTGCATATCCTCTTGCAATTATTTTGGTTGGAGTTGGTGATGGACCTTGGGACGACATGAAAAAGTTTGATGATAAGATACCAACGCGTGATTTTGACAATTTTCAGTTTGTTAACTTCAGTAGCATTATGAGTAAAAATACAAGCCCCTCAGAGAAAGAAGCAGCTTTTGCTCTGGCTGCACTGATGGAGATTCCTTTCCAATACAAAGCATGTCTTGAATTGAAAATACTTGGGCATGTGACAGGAAGAGCAAAGAGAATAGTTCCAAAACCTCCTCCTGTTCCTTATACTAGGCCTTCAGCTGCGGCCCTGGGCCGTGTGCCAAGCAGCACACAAGCATCCACAACAGATGAGCAAAACCAAATGGTATGCCCTATATGTCTGACCAATGGAAGGGATTTGGCATTTGGATGTGGCCACATGACTTGCAGAGAATGTGGATCCAAGTTAAGTCACTGCCCTATTTGTCGTGAAAGGATCACAAGTAGATTGAGGGTGTTCACTGGATGA 1356 0.4167 MGNLLARNKNKKSGQNSRNPGRTPSSIRSRIVLPPHLAFPPQPPQFPSSQAEPQQPQPPQRAQSISRRPSFGKNSMNNNSGQGSVAMGNKQLVTKKYALITDNFTTLEQVQMALKKEGLESSNLILGIDFTKSNEWTGKISFNNRSLHAIGDTPNPYEKAISIIGKTLAPFDDDNLIPCFGFGDATTHDQEVFSFHGDHSPCHGFEEVLECYQKIVPNLKLSGPTSYAPVMEAAIDIVEKNRGQFHVLVIIADGQVTRSVNTEDGELSSQEEKTIKAIVDASAYPLAIILVGVGDGPWDDMKKFDDKIPTRDFDNFQFVNFSSIMSKNTSPSEKEAAFALAALMEIPFQYKACLELKILGHVTGRAKRIVPKPPPVPYTRPSAAALGRVPSSTQASTTDEQNQMVCPICLTNGRDLAFGCGHMTCRECGSKLSHCPICRERITSRLRVFTG* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0862 451 SMART VWA_4 121 324 IPR002035 -
Aev10g0862 451 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 391 450 IPR013083 -
Aev10g0862 451 CDD RING-HC_RGLG_plant 405 449 IPR045317 GO:0061630|GO:0070534
Aev10g0862 451 ProSiteProfiles Zinc finger RING-type profile. 406 439 IPR001841 -
Aev10g0862 451 SMART ring_2 406 438 IPR001841 -
Aev10g0862 451 MobiDBLite consensus disorder prediction 55 86 - -
Aev10g0862 451 PANTHER UBIQUITIN-PROTEIN LIGASE RGLG2-LIKE PROTEIN, PUTATIVE-RELATED 1 449 - -
Aev10g0862 451 SUPERFAMILY vWA-like 122 305 IPR036465 -
Aev10g0862 451 PANTHER COPINE FAMILY PROTEIN 1 1 449 - -
Aev10g0862 451 SUPERFAMILY RING/U-box 398 445 - -
Aev10g0862 451 MobiDBLite consensus disorder prediction 1 26 - -
Aev10g0862 451 MobiDBLite consensus disorder prediction 36 54 - -
Aev10g0862 451 MobiDBLite consensus disorder prediction 1 86 - -
Aev10g0862 451 Pfam Copine 146 359 IPR010734 -
Aev10g0862 451 Pfam Zinc finger, C3HC4 type (RING finger) 403 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0862 Aev-Chr10 11168716 11181571 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g0862 10 11168716 11181571 Aev08g1364 08 8926678 8937355 PCT