Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2664 ATGGCGACCCACGATGGCTCATCATCATTCTCAAGCCCACGCGCATACCTACGCGCCCTCTCACGCACCCCTTCCCGCTTCGCTCGCCGCGCCGTTTCGGTCTCCACCTCCTACGACGAAATGAGCCGCGTTCGTGCCCTCTCCGGCTCCGACATGCGCAAGACCCTCCGCTGGTACGACCTCGTCGGATTCGGTATCGGCGGTATGGTCGGCGCCGGCGTTTTCGTCACCACTGGCCGCGCCACCCACCTCTATGCCGGCCCCGCCGTCGTCCTCTCCTACGCCATTGCTGGCCTCTGCGCCCTCCTCTCCGCCTTCTGCTACACCGAGTTCGCCGTCGACATGCCTGTCGCCGGCGGCGCCTTTAGCTATCTTCGCGTCACTTTCGGTGAGTTTGCGGCGTTTCTAACCGGAGCGAACCTCGTGATGGACTACGTGATGTCCAATGCGGCGGTTTCCAGAGGCTTCACCTCGTATTTCGGCACCGCAATCGGAATCTCCTCCTCGAAATGGAGGCTAACAGTGCCTTCTCTTCCCAACGGGTTCAATCAGATTGATCTCGTATGCCGTCGCCGTCGTTTTGCTCGTCACAATCGTCATCTGCTACAGTACGAGGGAGAGCTCGGTGGTGAATATGATATTGACGGCGCTGCACATTGTGTTCATAGCGTTTGTGATATTGATAGGGTTCTGGAGAGGGAGTTGGAAGAATTTCACGGAGCCAGCAAACCCGGAGAAATACCCGTCGGGGTTCTTTCCTTACGGGGCTTCGGGCGTGTTCAACGGTGCGGCAATGGTGTACCTGAGTTACATTGGGTACGACGCCGTTTCGACGATGGCAGAGGAAGTGAAGGATCCGGTCAAAGATATCCCAATCGGTGTCTCTGGATCGGTTGCGATTGTCACTGTCCTCTATTGCCTCATGGCTGCCTCTATGTCAAAACTTCTCCCATACGATTTGATCGATGGAGAAGAGCCGTTTTCGGCGGCGTTCAGAGGGAGATCGGACGGGTGGGGATGGGTGTCGCGGGTGATAGGAGTGGGGGCCAGCTTCGGGATATTGACGTCTCTGTTGGTGTCCATGCTTGGTCAGGCTCGTTACATGTGCGGATCATCACAGCGGCAATTGCCCTTTTCACTGAGCTGGACGTGCTCCTGAATCTGGTGTCGATTGGCACACTCTTTGTCTTTTACATGGTGGCAAATGCAGTGATCTACAGACGCTATGTGGTGATTGGGACAACAAACCCATGGCCTACACTGTCCTTCCTCTGCTCATTCTCCTTTACCTCCATACTGTTCACCCTCATCTGGAAGCTGGTGCCCACCGGAAGGGCCAAGGCTGGCATGCTGAGTGCGTGTGCCGTAATTGCGGTCGCAATATTGCAGGTTTTCCACTACATGGTCCCTCAGGCACGGAAGCCAGAGTTCTGGGGTGTCCCACTCATGCCATGGATACCTTCCATCTCCATATTCCTCAACGTGTTCCTGCTTGGATCACTGGATGGGCCATCCTATGTTCGGTTTGGGTTCTTTTCGGCTCTTGCACTGCTTGTCTATGTCTTTTACAGTGTCCATGCTAGCTTTGATGCTGAAGGAGATGGCTCCCTTACCCAAAAGAATGCTCAAATCATCATCCACGTCGAACCTAAACAATGTGATCAGGATGATCAATTAACTTTCAAGCCTGCAGATCTCTCACCGGAGCTTCAATCACCGGCGGCGGCCTTGCCCTCGCCTCGCCTCGCCTCGCGCCTCGCCTCGCCTCGCGCCTCGCCTTTCTATTTGGTTGGTTGGCATGAAATTATATGTGACAATCGTGCCATGAAAAGCCCAGTTAGAAGGCCCAATAAGCGAAGGGTCAGTTTTCTCGCGCCCTCGCCCTCACCTTTGGAACGGTGTGGCTGCGTTGGCGCTGAGTCTGATTCCGAGCAAGGCGAAGTAAAGCTCAACTCCATCTTCTCCAAGCAGCAGGATGATGGTGAAACACCTACACTAGACTGGTGTGGGAGATTCCGTGACTATTCTATCATCCATTTTAGGAAAATATCGGTTATTTCTGAGGCCAAACCGGAGCTCTTAAATGTGAAAGAAGTTGTTCATGTGGATGCAGATGCTTCTCGTGTTTCAAACCTGCACTATGTGTTGCAGTTATATGCCAAAACAAGATCTTCCATGGGAGGAAGGGCATGCCATGCTCAGGCTATTCGTATTGGCTTGGAAACGGACGTTTTAACATCAAATATGCTGATTAATATGTACTCTAAATGTGCTTTAGTTGATGATGCTCGCAAAAAGTTCAATGAAATGTCAGTGAAAAGCTTAGTTTCATGGAACACAATGATCGGAGCACTCACCCAGAATGCAGAGGAGCAGGAAGCTCTCACACTTTTCATTCAAATGCAAAGAGAGGGAACCCCCTTCAATGAGTTTACCATTTCCAGTGTTCTATGTGCATGTGCCTTGAATTCTGCTATACTTGAGTGCATGCAGTTGCATGCTTTTTCAATTAAGACTTGCATAGATTCAAATTGTTTTGTCGGAACTGCCTTACTCGATGTCTATGCGAAATGCTCTTCGATTAAAGATGCAAGTCGGGTATTTGAGAGTATGCCAGAAACCAGTGCTGTTACGTGGAGTTCAATGTTAGCTGGATATGTGCAAAATGGTTTTCATGAGGATGCCTTGCTGCTTTTCCGCAAAGCTCAGTTGATGGGTTTCGAGCAGGACCCATTTATGGTCTCATCTGCTATTTGTGCTTGTGCAGGTCTGGCAACATTGATTGAAGGGAGACAAGTGCATGCTATGTCATGTAAATCTGGATTTGGTTCGAACATTTATGTTGCCTCTTCCCTTATAGACATGTATGCCAAATGTGGCTGCATAAGAGAGGCTTACCTTGTGTTTCAAGGTGTGCAGATGAGAAGTATGGTTTTATGGAATGCAATGATTGCTGGGTTTGCTAGACATGCTTGTGCACTAGAGGCTAGGATCTTATTTGAAAAAATGCAGCAGAGAGGGTTCTTTCCTGATGATGTAACATATGTATCTGTATTGAATGCATGTAGTCATATGGGTCTGCATGAAGAAGGACAGAAATACTTTGAACTCATGGGCAGACAGCACAATCTTTCACCCAGTGTTCTTCACTATTCATGTATGATCGATATTCTTGGCCGTGCGGGACTGATTCAGCAGGCCTATGACTTGATGCAGAGAATGCCATTTGATGCAACTACTTCTATGTGGGGTTCAATTTTAGCCTCTTGCAGAAATTATGGCAATATTGAGTTTGCTGAGATTGCAGCCAAGCATCTGTTTGAAATGGAACCTAACAATGCTGGAAACCACATCTTGCTAGCAAACATATATGCGACAAATAAAAAGTGGGATGAAGTTGCCAGAGCAAGGAAGCTTATCAGAGAGAGCGATCTGCGGAAGGAGAGGGGTACGAGCTGGATTGAAATAAAGAATGAGGTTCATTCGTTTACTGTTGGTGAGAGGAATCATCCACAAATCAATTTGATTTATGTTAAGTTGGATTGTTTGATAGAAGAGTTGCAGAAGCTGGATTACAAGGTTGATACCAGCCATGACTTGCACGATGTCGATGAGAGCAGAAAACAGATGCTTTTGAGGCACCACAGTGAGAAACTTGCTGTTACCTATGGATTGATGTGTTTACCTAGTGATCATATACCAATAAGGATTATGAAAAACCTGAGAATTTGTGGTGATTGCCACAATTTTATGAAACTTGTATCTAAGTTTACAAGCAGAGAGATCATTGTTCGAGATACAAATCGTTTTCACCACTTTAAGGATGGTTTCTGTTCTTGTGGAGAGTTTTGGTGA 3855 0.484 MATHDGSSSFSSPRAYLRALSRTPSRFARRAVSVSTSYDEMSRVRALSGSDMRKTLRWYDLVGFGIGGMVGAGVFVTTGRATHLYAGPAVVLSYAIAGLCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFLTGANLVMDYVMSNAAVSRGFTSYFGTAIGISSSKWRLTVPSLPNGFNQIDLVCRRRRFARHNRHLLQYEGELGGEYDIDGAAHCVHSVCDIDRVLERELEEFHGASKPGEIPVGVLSLRGFGRVQRCGNGVPELHWVRRRFDDGRGSEGSGQRYPNRCLWIGCDCHCPLLPHGCLYVKTSPIRFDRWRRAVFGGVQREIGRVGMGVAGDRSGGQLRDIDVSVGVHAWSGSLHVRIITAAIALFTELDVLLNLVSIGTLFVFYMVANAVIYRRYVVIGTTNPWPTLSFLCSFSFTSILFTLIWKLVPTGRAKAGMLSACAVIAVAILQVFHYMVPQARKPEFWGVPLMPWIPSISIFLNVFLLGSLDGPSYVRFGFFSALALLVYVFYSVHASFDAEGDGSLTQKNAQIIIHVEPKQCDQDDQLTFKPADLSPELQSPAAALPSPRLASRLASPRASPFYLVGWHEIICDNRAMKSPVRRPNKRRVSFLAPSPSPLERCGCVGAESDSEQGEVKLNSIFSKQQDDGETPTLDWCGRFRDYSIIHFRKISVISEAKPELLNVKEVVHVDADASRVSNLHYVLQLYAKTRSSMGGRACHAQAIRIGLETDVLTSNMLINMYSKCALVDDARKKFNEMSVKSLVSWNTMIGALTQNAEEQEALTLFIQMQREGTPFNEFTISSVLCACALNSAILECMQLHAFSIKTCIDSNCFVGTALLDVYAKCSSIKDASRVFESMPETSAVTWSSMLAGYVQNGFHEDALLLFRKAQLMGFEQDPFMVSSAICACAGLATLIEGRQVHAMSCKSGFGSNIYVASSLIDMYAKCGCIREAYLVFQGVQMRSMVLWNAMIAGFARHACALEARILFEKMQQRGFFPDDVTYVSVLNACSHMGLHEEGQKYFELMGRQHNLSPSVLHYSCMIDILGRAGLIQQAYDLMQRMPFDATTSMWGSILASCRNYGNIEFAEIAAKHLFEMEPNNAGNHILLANIYATNKKWDEVARARKLIRESDLRKERGTSWIEIKNEVHSFTVGERNHPQINLIYVKLDCLIEELQKLDYKVDTSHDLHDVDESRKQMLLRHHSEKLAVTYGLMCLPSDHIPIRIMKNLRICGDCHNFMKLVSKFTSREIIVRDTNRFHHFKDGFCSCGEFW* 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2664 1284 TIGRFAM PPR: pentatricopeptide repeat domain 776 807 IPR002885 -
Aev09g2664 1284 TIGRFAM PPR: pentatricopeptide repeat domain 877 910 IPR002885 -
Aev09g2664 1284 TIGRFAM PPR: pentatricopeptide repeat domain 978 1011 IPR002885 -
Aev09g2664 1284 Pfam PPR repeat 849 873 IPR002885 -
Aev09g2664 1284 Pfam PPR repeat 1050 1074 IPR002885 -
Aev09g2664 1284 Pfam PPR repeat 746 772 IPR002885 -
Aev09g2664 1284 Pfam PPR repeat 877 906 IPR002885 -
Aev09g2664 1284 Pfam PPR repeat 950 970 IPR002885 -
Aev09g2664 1284 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 976 1010 IPR002885 -
Aev09g2664 1284 Pfam E motif 1093 1155 IPR046848 -
Aev09g2664 1284 Pfam DYW family of nucleic acid deaminases 1192 1284 IPR032867 GO:0008270
Aev09g2664 1284 Pfam PPR repeat family 977 1023 IPR002885 -
Aev09g2664 1284 Pfam PPR repeat family 774 821 IPR002885 -
Aev09g2664 1284 Gene3D Tetratricopeptide repeat domain 931 1031 IPR011990 GO:0005515
Aev09g2664 1284 Gene3D Tetratricopeptide repeat domain 681 827 IPR011990 GO:0005515
Aev09g2664 1284 Gene3D Tetratricopeptide repeat domain 828 928 IPR011990 GO:0005515
Aev09g2664 1284 Gene3D Tetratricopeptide repeat domain 1032 1170 IPR011990 GO:0005515
Aev09g2664 1284 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 774 808 IPR002885 -
Aev09g2664 1284 Gene3D Amino acid/polyamine transporter I 51 179 - -
Aev09g2664 1284 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 875 909 IPR002885 -
Aev09g2664 1284 PANTHER OS12G0156900 PROTEIN 712 1275 - -
Aev09g2664 1284 Pfam C-terminus of AA_permease 478 528 IPR029485 -
Aev09g2664 1284 Pfam Amino acid permease 57 174 IPR002293 GO:0016020|GO:0022857|GO:0055085
Aev09g2664 1284 PANTHER OS07G0578800 PROTEIN-RELATED 712 1275 IPR045215 GO:0003723|GO:0009451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2664 Aev-Chr9 27667712 27683133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2664 728 1284 Glycoside Hydrolase AT3G49170 38.869 3.56e-129 417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2664 09 27667712 27683133 Aev09g2664 09 27667712 27683133 ECH