Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2638 ATGAAGGTTTTCGTTAAGACTCTGAAAGGCACTCACTTCGAAATTGAAGTGAAGCCCGAAGACACGGTTTCTGAAGTGAAGAAAAATATAGAAACTGTTCAGGGTGCAAATGTCTATCCTGCTGCACAGCAAATGCTAATTCATCAGGGCAAGGTTCTTAAGGATGGTACTACATTAGAAGAAAATAAAGTAGTGGAAAATAGCTTCATTGTAATAATGCTATCAAAGAGTAAGAGCACATCTGGTGAAGGGTCTACTACAACTGCACCTTCAACAAAGGCTCCTCAGACAAGTGCAGCTCCTACTTTGACTGCTCCAGCACCAGTAACACCTCAAGCTCCTCCTGCAACTGTTGTTCCACCTCCATCTGTTGCTGCACCTGTACCTGCACCTGCTGCTGCTCCTGTATCATCGGACACTGCTGTGGCAGGGTCTGATATCTATGGCCAGGCAGCATCCAATCTGGTTGCTGGAAGCAACTTGGAGGAAACAGTTCAGCAAATCCTTGACATGGGTGGAGGGAGCTGGGACAGGGAAACTGTGATCCGTGCTCTTCGAGCTGCTTACAACAACCCTGAGAGGGCTGTTGAGTATTTGTACACAGGTATCCCTGAGCAAGCTGAAGCTCCACTTGCAGCCCGTGTTCCTGCAAGTGCACAACCTGCAAATCCTCCAGCTGCTGCACCTCAAGCAGCACAACCAGCTCCAGCTACTGCAAGTGGGCCAAATGCCAACCCTTTAGATCTTTTTCCCCAGGGCCTTCCCAATGTTGGCTCTGGTGCTGCTGGTGCTGGCTCTTTAGATTTTCTGCGCAACAGTCAACAATTTCAAGCCTTGCGAGCTATGGTGCAAGCTAATCCACAGATATTGCAGCCTATGCTACAAGAGCTTGGCAAACAGAATCCCCATCTTATGAGATTGATACGAGATCATCAAGCTGACTTCCTTCGCCTTATTAATGAACCTGTGGAAGGTGGTGAGGGGAATTTACTTGGGCAGCTGGCTGCTGGCATGCCACAAGCACTGACTGTTACCCCTGAGGAACGCCAGGCAATTGAACGTCTCGAAGCAATGGGTTTTGATCGTACACTTGTGTTGGAGTCAGACCCTGGTGGGGCTGCTGAGGTTTTGCTTACCCAAGGGTTGCTGAATCATCAATGTTACGGTGATCCAAATTACATTTTTCTTCTTGACTCGTTTCGTTTGGCTAAGCATTCCGCATTGGTAGCCAACCTTCACGTTGTGGTTCCTAATTCCTATATCCTATCGCAAAAAACAAAGCAAAGCAAAACCTCTCTCTTTCTCATTCCCACTACACCACACGCTTCTTCCTATGACCTTCATAGTCCAAAACAAAAACCTCCGTTTTTGACATTTCAACGTTTCGGACTTGTTTTTATATTTTGTTCTCCGAAGGAATGGTGTGGTGAGTTCCTTCTCCAACCCATAATGGTGTTTAGCGTGATGATGGACAATGATAACGCTGCTAGTTGTGACCTTAATCTGCCCGATCATGTGTTTGATTCGCCCCTTTCCGCCATAGCCGAGGCCTTCGAGGAACTCGCCAAACGCCTCAAGCAAGACGACCTTCCCCTCGACCCCTTCTGCAACACCTGCTCTCTCGTCTCTGTTCTCTTCAGTTCTCTTGGCCTCGCTTTCAAATTCGCTGAATTGGAATACGTCGCCAAGCTAGAAGGACTTCTGGAAGCATCGAAGACATGTGACACTCTGAATGATGTGATTGATCTTGATGTTGCGAGCGACACCGTAAAATCTTCAGGAAGCTGTTCGCGCCATCTGCGTAGAGTTCGTCAGGGAATTGATCTTGTCAAAGCTATATTTGAACTACTTTTGTCAACTGATGATAGTTCCCTAAAAGAAATAGCAACAACAGCTTATGGACGGGTGTGTGCACCATATCACACATGGGCAGTAAGAACAGCCGTGTATGCTGGTATGTATACACTCCCAACAAGAGACCAACTTTTCTTGAGGCTCAATGAAACAGAGCAGACAGCTGAAAAGAAGATGAGGAGGTACATCAAGGCCTCACGTCCAATCATTGAATACATTGATGAACTGTACCTTTCTCGAGATATTGTGTTGGACTGGTGA 2115 0.4686 MKVFVKTLKGTHFEIEVKPEDTVSEVKKNIETVQGANVYPAAQQMLIHQGKVLKDGTTLEENKVVENSFIVIMLSKSKSTSGEGSTTTAPSTKAPQTSAAPTLTAPAPVTPQAPPATVVPPPSVAAPVPAPAAAPVSSDTAVAGSDIYGQAASNLVAGSNLEETVQQILDMGGGSWDRETVIRALRAAYNNPERAVEYLYTGIPEQAEAPLAARVPASAQPANPPAAAPQAAQPAPATASGPNANPLDLFPQGLPNVGSGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPVEGGEGNLLGQLAAGMPQALTVTPEERQAIERLEAMGFDRTLVLESDPGGAAEVLLTQGLLNHQCYGDPNYIFLLDSFRLAKHSALVANLHVVVPNSYILSQKTKQSKTSLFLIPTTPHASSYDLHSPKQKPPFLTFQRFGLVFIFCSPKEWCGEFLLQPIMVFSVMMDNDNAASCDLNLPDHVFDSPLSAIAEAFEELAKRLKQDDLPLDPFCNTCSLVSVLFSSLGLAFKFAELEYVAKLEGLLEASKTCDTLNDVIDLDVASDTVKSSGSCSRHLRRVRQGIDLVKAIFELLLSTDDSSLKEIATTAYGRVCAPYHTWAVRTAVYAGMYTLPTRDQLFLRLNETEQTAEKKMRRYIKASRPIIEYIDELYLSRDIVLDW* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2638 704 CDD UBA1_Rad23_plant 155 204 - -
Aev09g2638 704 Pfam XPC-binding domain 267 322 IPR015360 GO:0003684|GO:0006289|GO:0043161
Aev09g2638 704 Pfam UBA/TS-N domain 161 199 IPR015940 -
Aev09g2638 704 SUPERFAMILY Ubiquitin-like 1 82 IPR029071 -
Aev09g2638 704 MobiDBLite consensus disorder prediction 79 105 - -
Aev09g2638 704 PANTHER UV EXCISION REPAIR PROTEIN RAD23-RELATED 1 367 - -
Aev09g2638 704 Gene3D - 258 323 IPR036353 GO:0003684|GO:0006289|GO:0043161
Aev09g2638 704 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 159 202 IPR015940 -
Aev09g2638 704 Pfam Glycolipid transfer protein (GLTP) 532 667 IPR014830 GO:0005737|GO:0120009|GO:0120013
Aev09g2638 704 Gene3D - 340 368 - -
Aev09g2638 704 Gene3D Glycolipid transfer protein 504 704 IPR036497 -
Aev09g2638 704 SUPERFAMILY Glycolipid transfer protein, GLTP 525 700 IPR036497 -
Aev09g2638 704 SMART ubq_7 1 75 IPR000626 GO:0005515
Aev09g2638 704 PANTHER UV EXCISION REPAIR PROTEIN RAD23 1 367 - -
Aev09g2638 704 SUPERFAMILY UBA-like 329 379 IPR009060 GO:0005515
Aev09g2638 704 SMART uba_6 161 201 IPR015940 -
Aev09g2638 704 SMART uba_6 348 379 IPR015940 -
Aev09g2638 704 TIGRFAM rad23: UV excision repair protein Rad23 1 367 IPR004806 GO:0006289
Aev09g2638 704 ProSiteProfiles Ubiquitin domain profile. 1 79 IPR000626 GO:0005515
Aev09g2638 704 MobiDBLite consensus disorder prediction 215 252 - -
Aev09g2638 704 PRINTS DNA repair protein Rad23 signature 293 315 IPR004806 GO:0006289
Aev09g2638 704 PRINTS DNA repair protein Rad23 signature 359 373 IPR004806 GO:0006289
Aev09g2638 704 PRINTS DNA repair protein Rad23 signature 342 358 IPR004806 GO:0006289
Aev09g2638 704 Pfam Ubiquitin family 3 76 IPR000626 GO:0005515
Aev09g2638 704 SUPERFAMILY UBA-like 158 208 IPR009060 GO:0005515
Aev09g2638 704 MobiDBLite consensus disorder prediction 79 120 - -
Aev09g2638 704 Gene3D - 1 80 - -
Aev09g2638 704 SUPERFAMILY XPC-binding domain 264 329 IPR036353 GO:0003684|GO:0006289|GO:0043161
Aev09g2638 704 Gene3D - 154 204 - -
Aev09g2638 704 SMART CBM 265 308 IPR006636 -
Aev09g2638 704 CDD Ubl_Rad23 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2638 Aev-Chr9 27516712 27523168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2638 508 704 Acyl Lipid Metabolism Gene Families AT4G39670 65.366 8.36e-92 283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2638 09 27516712 27523168 Aev09g2638 09 27516712 27523168 ECH