Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2633 ATGCCCGAGCCTCGGAAACAACCGGCCAATAGACTCAAACAAAGGAGTCTGTCCTTCCCTGAGTCCAAGATGACAAGAAAACTTCGCATCATCTACACCGATCCTGATGCAACTGACTCTTCAGACGATGAATCAGACATGTTTCTCAACCAAAAGAAAATCAAAAGAAACATATGCGAGATCCCTCTCCCCCTGGTCTCTGCACTCTCCACCCCCACCAGCTCCTGTGAGTTGAATGCATGCAACAACTCCTTGAAGGGTCAAAACCCTTCCAAGAAGAGGGTTTTAACCCAAAACCCTTCAATCAGGAGGCAAACCGCTGGAAAATACAGAGGCGTTAGGCAGAGAAAGTGGGGGAAGTGGGCAGCTGAGATTCGTGACCCTTTCAAGAGTGCCAGAATCTGGTTAGGCACTTATGACACTGCAGAAGCTGCTTCCCAAGCCTACGAGGCTAAAAGGCTCGAGTTTGAAGCCATGGCAAGGTCTCAATCCATCAAGAGCCACGATGGTTCTTCCTCTGCTGCTCCTGTGCCTACATCTTCCGATAAGAGTAACTGCTGCAACTCTTCTCCCGGTGCTGCTCCTGCCGTTTCTGCTTCTGTTTCTGTATCCGACAAGTCTTCCAATGTTGAGGATTCTGAGAGTGCTCTCTCTCACACATCACCATCCTCTGTTCTTGAGTTGGATACTCTGGCTTCTACTCTTAACGAGAAGGGTATTGTTGCTGCAAGCAGTGAAGCTGTTGTTGAGACCAATGATTTGGTGGCTGAACTATCTGGGTTGGAAATACCAGATTTGAGTGTGCTGGGCTTGCCATTGCCTCCACCAACCGCTGCTGATGCTACTACTTCTGGGGCTCAGAATAACTTCGATCTTGATTTTGGATGGTTGAACTTTGATGATTTTGGTCAAGGCTTTGATGATCTTGGTGGTGGCTTCGAGGATATACAAATATGTGGCTTTGATGACAATGAGCCTAGTGAGCTTCCTGATTTCGACTTTGGTGATTTTTGTGCTGATGAGTTCGCTGGTTGGACTGAGGGACCCCTCAATATACCGTGCGCTTAA 1068 0.4794 MPEPRKQPANRLKQRSLSFPESKMTRKLRIIYTDPDATDSSDDESDMFLNQKKIKRNICEIPLPLVSALSTPTSSCELNACNNSLKGQNPSKKRVLTQNPSIRRQTAGKYRGVRQRKWGKWAAEIRDPFKSARIWLGTYDTAEAASQAYEAKRLEFEAMARSQSIKSHDGSSSAAPVPTSSDKSNCCNSSPGAAPAVSASVSVSDKSSNVEDSESALSHTSPSSVLELDTLASTLNEKGIVAASSEAVVETNDLVAELSGLEIPDLSVLGLPLPPPTAADATTSGAQNNFDLDFGWLNFDDFGQGFDDLGGGFEDIQICGFDDNEPSELPDFDFGDFCADEFAGWTEGPLNIPCA* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2633 355 Pfam AP2 domain 109 158 IPR001471 GO:0003700|GO:0006355
Aev09g2633 355 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 13 355 - -
Aev09g2633 355 SUPERFAMILY DNA-binding domain 109 156 IPR016177 GO:0003677
Aev09g2633 355 MobiDBLite consensus disorder prediction 164 222 - -
Aev09g2633 355 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Aev09g2633 355 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Aev09g2633 355 MobiDBLite consensus disorder prediction 1 21 - -
Aev09g2633 355 CDD AP2 109 156 IPR001471 GO:0003700|GO:0006355
Aev09g2633 355 ProSiteProfiles AP2/ERF domain profile. 109 166 IPR001471 GO:0003700|GO:0006355
Aev09g2633 355 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 13 355 - -
Aev09g2633 355 MobiDBLite consensus disorder prediction 163 222 - -
Aev09g2633 355 SMART rav1_2 109 163 IPR001471 GO:0003700|GO:0006355
Aev09g2633 355 Gene3D AP2/ERF domain 108 162 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2633 Aev-Chr9 27481450 27482517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2633 11 354 AP2-EREBP Transcription Factor Family AT1G68550 36.313 1.13e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev09g2633 AP2 2.7e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2633 09 27481450 27482517 Aev09g2633 09 27481450 27482517 ECH