Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2630 ATGAGTTCGGCTAAGAAGGTGGCGAACGCTGTGGGTGGGAAAACGGCAAGAGCGTGCGACAGCTGCATAACGAAGCGTGCTCGCTGGTACTGTGCTGCCGACGATGCTTTCCTCTGCCAAGCTTGTGACTCTTCCGTTCACTCTGCCAACCCACTGGCTCGCAGGCACGAACGAGTCCGCCTCAAAACGACGTCGTATAACAACAATAAGTCCTCTGACTCATCAGCTCTGACTCCGTCGTGGCACCACGGCTTCACAAAGAAAGCTCGAACACCCAGACACGGCGGCAAGAGTACTACTCATTCAACGAATTATTCATCAACACCGACACACAAGTCTTGGAGTAACCACCCGTTCCATCTGGTGCCGGAAGAGGGTCATTCGGAGGAAGTGAATTCCCAGGATGAAGAGATGAGCGATGAGGCTCAGCTTCTTTACAGGGTTCCCATATTCGACCCTTTTGTTGAAGCAGAGCTGTGCAGCCCTCCTTCCTCTGTTAATTCAGCCGGAGCAGTGACTGATACTGCTGATGTTGTTGTTGAAAACAAAGGGATGATGGGCAGCGAGAGCATGAGCATGAGCATGAGCAAGGTGGTTTGCTGTTTCAATAATGGTGGGGTTGAGAGCAGCAGCAGCAGCAGCTTGCAGGGGCTTCTTGCGACGGAGATTGAACTTGCTCAGTTTGCTGCTGATGTTGAGAGCTTGTTGGGTAGGGAGCTCGAAAACGAATGCATAGGGATGGAAGAGCTTGGCCTGCTTGTTGATAACAATCAGAAGGAGAAGGAGTGTTCTGTGAAGGTGGAACATAATAATAATAATAATAGTGAAGAGCAGAGCACGGAAGAAGTAGCAGTACTGGATGTGGCTTCTTCCAGAGGAGGAGAACCGCCGTTTGAGTTGAGCTTTGATTATGATTATGATCATGATTATGATGAGGTGAAGAAGCAGGAGGAGGCTGTTATTGATGATTTGGACAAGCAGGCCAAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGATCATGATGAGGAAAAGATCAGGAGGAAGATATTATTAATGTTGCAGCTAGATTATGAGGGAGTAATCACTGCCTGGGCTAGCGAGAAAAAGTCTCCATGGACTACCCCTCACAAACCAAACTTATTGGACCACCATCACTGCATGGTGGGAAGTAGTGTTTGCGGGACGCAGATTGATCATCCTTATGGTGAAATGTTTGGGTTGCATCCAGCAGTTACTATGGGAGACGGAGGTAGAGAGGCTAGAGTGTCGAGGTACAGAGAAAAACGCAGAACAAGGTTGTTCTCCAAGAAAATAAGGTACGAGGTTCGGAAGTTGAATGCTGAGAAGAGACCCAGAATGAAAGGCAGGTTTGTCAAGAGGGCTTCCTTTGCAGCACCTCCCACATTTTCCCTTGCTAAATAA 1422 0.4887 MSSAKKVANAVGGKTARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKTTSYNNNKSSDSSALTPSWHHGFTKKARTPRHGGKSTTHSTNYSSTPTHKSWSNHPFHLVPEEGHSEEVNSQDEEMSDEAQLLYRVPIFDPFVEAELCSPPSSVNSAGAVTDTADVVVENKGMMGSESMSMSMSKVVCCFNNGGVESSSSSSLQGLLATEIELAQFAADVESLLGRELENECIGMEELGLLVDNNQKEKECSVKVEHNNNNNSEEQSTEEVAVLDVASSRGGEPPFELSFDYDYDHDYDEVKKQEEAVIDDLDKQAKEEEEEEEEEDHDEEKIRRKILLMLQLDYEGVITAWASEKKSPWTTPHKPNLLDHHHCMVGSSVCGTQIDHPYGEMFGLHPAVTMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAAPPTFSLAK* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2630 473 CDD Bbox1_BBX-like 18 61 - -
Aev09g2630 473 MobiDBLite consensus disorder prediction 324 344 - -
Aev09g2630 473 Pfam CCT motif 418 460 IPR010402 GO:0005515
Aev09g2630 473 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 466 - -
Aev09g2630 473 MobiDBLite consensus disorder prediction 96 115 - -
Aev09g2630 473 ProSiteProfiles CCT domain profile. 418 460 IPR010402 GO:0005515
Aev09g2630 473 MobiDBLite consensus disorder prediction 65 115 - -
Aev09g2630 473 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 6 1 466 - -
Aev09g2630 473 SMART bboxneu5 14 61 IPR000315 GO:0008270
Aev09g2630 473 Coils Coil 314 348 - -
Aev09g2630 473 MobiDBLite consensus disorder prediction 65 81 - -
Aev09g2630 473 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
Aev09g2630 473 Pfam B-box zinc finger 16 59 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2630 Aev-Chr9 27455491 27457083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2630 5 460 C2C2-CO-like Transcription Factor Family AT1G25440 43.103 1.26e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Aev09g2630 zf-B_box 1e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2630 09 27455491 27457083 Aev09g2630 09 27455491 27457083 ECH