Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2620 ATGAAAGGAAGGAGACCATCAGGAGGAAATAGCCCCTTAGACCTCAACAATTTTCCTGATGACTACTCCTCTAGAGATAATGGTAAACAAATCCTTGAAGATATCTCCTCACCCGGAGGAGGATGCAGCAGCAGGAAAAAGAAAAGCGGCGGCAAGGATGGAAAAGAGGAGTGTGGGAAGGTCTACGAGTGTAGATTTTGTTCCCTCAAGTTCTGCAAGTCTCAGGCTCTTGGGGGACACATGAACCGCCACCGCCAAGAGAGGGAAACAGAGACGCTGAATCAAGCTCGTCAGCTGGTCTTCCGTAGCGATCACAACCTTGCTGCACAACCTCCCCCTCACCTAGGATGCTGTCAACCAATAGGAGGAGGGGGCTATCACCCATCAGGCAACATGGGAGACCCAACAGTGCCTCTGAGATTCCCAAGATACTTTTCTGCTTCCTCCTCATCAACACACATTCCTCCACCACCACCACCGCCTCAACCGTATCTGTACGCCTCTCCTCCGTCAAGGGCGGCGCCAGTGTCCTTCCCTCACGATTACTACGTGGGGCATGTCCTGGGCAGCAGCAGCAGCCATGGGCTCCCCAGCTACGCAGCGGGAGGGGCAGCAGACTCTGGTAGTTACACCTGCATTGGTGCACCGGTGGGACAAGCAGTAGGAGTAGTGGGACTCGGTAGCAAGGACAGTGGGACAGTAGCAGTGCAGCAGCAGCAGGAAGAGTCGGCAGCAGGAGGCTTGAATTGGGGAAGGGCCGCCTATAATAATAATAATGGCAATAATAGTTCATCATCAGCAGCAGGAGGGGGAGGGGGAGGGGGAGGACATCATCATCGTTTGGATCATCCTGGTTCAGCGATCAATCGGTTTCAAGATGGGTTCTAA 888 0.536 MKGRRPSGGNSPLDLNNFPDDYSSRDNGKQILEDISSPGGGCSSRKKKSGGKDGKEECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNQARQLVFRSDHNLAAQPPPHLGCCQPIGGGGYHPSGNMGDPTVPLRFPRYFSASSSSTHIPPPPPPPQPYLYASPPSRAAPVSFPHDYYVGHVLGSSSSHGLPSYAAGGAADSGSYTCIGAPVGQAVGVVGLGSKDSGTVAVQQQQEESAAGGLNWGRAAYNNNNGNNSSSSAAGGGGGGGGHHHRLDHPGSAINRFQDGF* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2620 295 MobiDBLite consensus disorder prediction 1 56 - -
Aev09g2620 295 ProSitePatterns Zinc finger C2H2 type domain signature. 64 84 IPR013087 -
Aev09g2620 295 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 89 IPR013087 -
Aev09g2620 295 MobiDBLite consensus disorder prediction 255 295 - -
Aev09g2620 295 PANTHER ZINC FINGER PROTEIN JAGGED 10 238 IPR031113 GO:0007275
Aev09g2620 295 PANTHER ZINC FINGER PROTEIN JAGGED 10 238 IPR045320 GO:0003700
Aev09g2620 295 SUPERFAMILY beta-beta-alpha zinc fingers 59 107 IPR036236 -
Aev09g2620 295 MobiDBLite consensus disorder prediction 10 24 - -
Aev09g2620 295 MobiDBLite consensus disorder prediction 255 269 - -
Aev09g2620 295 Gene3D Classic Zinc Finger 44 112 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2620 10 223 C2H2 Transcription Factor Family AT1G13400 45.413 6.68e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev09g2620 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2620 09 27402704 27410986 Aev09g2620 09 27402704 27410986 ECH