Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2612 ATGTCAACAATTACAAAGAGATCAGAGTTCGGTTCAAATGAAGAAGAGAGTGAACTGAGAAGGGGCCCTTGGACTCTTGAAGAAGACAGTTTGCTGATACACTATATTGCTCGTCATGGAGAAGGTCGTTGGAATATGTTAGCCAAAAGTGCAGGATTGAAGAGGACTGGAAAAAGCTGCAGGCTCAGATGGCTGAATTACTTGAAACCTGACATTAAGAGAGGGAATCTCACCCCACAAGAACAGCTCTTGATCCTTGAACTCCATTCCAAGTGGGGTAACAGGTGGTCAAAAATTGCTCAGCATCTTCCAGGAAGAACAGACAATGAGATCAAGAACTATTGGAGAACAAGGGTGCAGAAACAGGCACGCCAACTCAACATTGAATCTGGAAGCAAAAGATTCATTGATGCTGTTAAGTGTTTTTGGATGCCAAGATTGCTTCAGAAGATGGAACAGAACACTTCCACAACCACATACTCTTCCATGACAAACATCAATTTCGGGAACAATAGTAATTCTGCAGAAGCTTCAATCAGTTCAGTTTCAAACTGCTCCAACAACAACATTCCATCTTTATCTACACCTTCTCCTCCACCAACAGAATTCATAGATGCTGCAAATCATTTCAGCACCATGTCCAGTAGCCCCAGCAATTACCCTTCCTCTGATTCATCACTCCAATTGTCACAGCTACTTGAGATGTCAGAACAACTAACAAGTACTACGCCAAATATGTTTGAGAACAACAATGTTTACACTTTTAATCCAATGATTCAGGACACAACATGGAGTGCTGTTGATAACAGCAGTAACTATGGCATGGAAGGCATAAACATGATGGATCCCCTGTCAGTAATGGGAACTTATGATATTCCACAGTTTGATTTTCAAACAGCTGGGAGTGACTGGATGTTTGACAGCATTGGAGGAGACACTTTATGGAACATGGATGCTATGTAA 963 0.4164 MSTITKRSEFGSNEEESELRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKRFIDAVKCFWMPRLLQKMEQNTSTTTYSSMTNINFGNNSNSAEASISSVSNCSNNNIPSLSTPSPPPTEFIDAANHFSTMSSSPSNYPSSDSSLQLSQLLEMSEQLTSTTPNMFENNNVYTFNPMIQDTTWSAVDNSSNYGMEGINMMDPLSVMGTYDIPQFDFQTAGSDWMFDSIGGDTLWNMDAM* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2612 320 PANTHER TRANSCRIPTION FACTOR MYB21-LIKE 10 318 - -
Aev09g2612 320 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Aev09g2612 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Aev09g2612 320 Pfam Myb-like DNA-binding domain 74 117 IPR001005 -
Aev09g2612 320 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Aev09g2612 320 CDD SANT 78 117 IPR001005 -
Aev09g2612 320 SMART sant 20 70 IPR001005 -
Aev09g2612 320 SMART sant 73 121 IPR001005 -
Aev09g2612 320 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Aev09g2612 320 Gene3D - 18 74 - -
Aev09g2612 320 CDD SANT 23 68 IPR001005 -
Aev09g2612 320 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 10 318 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aev09g2612 320 Gene3D - 77 119 - -
Aev09g2612 320 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 36 45 IPR001345 GO:0003824
Aev09g2612 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Aev09g2612 320 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2612 Aev-Chr9 27335182 27336432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2612 16 159 MYB Transcription Factor Family AT1G68320 84.028 1.21e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev09g2612 Myb_DNA-binding 3.4e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2612 09 27335182 27336432 Aev09g2612 09 27335182 27336432 ECH