Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2600 ATGGGGATGGGTTCAAAAATGGAAGGAACGTCTACCCCAGCAATTCGACGTGACCCATATGAGGTGTTGTCTGTGTCAAGAGACTCCACCGATCAAGAAATTAAAACCGCTTACAGAAAGCTTGCTCTCAAGTATCACCCTGACAAGAATGGCAGCAATCCTGAAGCTTCAGAATTATTCAAAGAGGTTGCATATTCTTATAGTATCTTGTCTGACCCAGAGAAGAGAAGGCAGTATGACAGTGCAGGATTTGAGGCACTTGATGCTGATAGCATGGACATGGAAATTGACTTATCTAATCTTGGGACTGTCAACACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCTATCAAGACTACCATTTCAGCCAATGTTCTTGAAGAAGCTCTGAATGGAACAGTTACAGTCAGACCCCTTCCTATTGGTACATCTGTTAGTGGAAAGGTAGAGAAGCAGTGTGCTCATTTTTTTGGTGTAACAATAAATGAGCAGCAAGCTGAGTCAGGGATTGTAATAAGAGTTACTTCAACTGCACAAAGCAAATTCAAGTTACTCTACTTTGAACAAGATGCAAATGGTGGCTATGGTTTGGCATTGCAGGAAGATAGTGAGAAGACTGGCAAGGTGACGTCTGCCGGGATGTATTTCTTACATTTTCAAGTGTACAGAATGGACTCAACGGTGAATGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTAGAAGGTCTCCAACCTTGTGAAGTCTCGGAACTAAAGCCTGGAACTCATATATTTGCTGTTTATGGTGATAACTTTTTTAAGACTGCTAGCTATACAATTGAGGCAGTCTGTGCGAAGTCATATGAAGATACCACCCAAAAACTCAAGGATATTGAGGCTCAAATTTTAAGAAAGAGGAATGAGCTACGCCAATTCGAATCAGAATATAGAAAGGCATTGGCACGCTATCAGGAAGTAACAGAGAGATACACAAAAGAAAAACAATCCGTAGACGAGCTTCTGAAACAAAGGGACGGTATCCATTCTTCCTTCACCATTGTCAAATCAACCAATATTAGTGGTACTGCTAGTAATCTAAGCAATGGAAGTTCGAGCAAGTTTTCTGGCGAAGATTCCAAAGCTGAAAGCCCTGACGGAGAAGATGGGGGGTCAGACGGCAAGGACAAATCAGGCAAAAAGAAATGGTTTAACCTCAATCTGAAGGGTTCTGATAAGAGGTTGATTTAG 1248 0.4199 MGMGSKMEGTSTPAIRRDPYEVLSVSRDSTDQEIKTAYRKLALKYHPDKNGSNPEASELFKEVAYSYSILSDPEKRRQYDSAGFEALDADSMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEQQAESGIVIRVTSTAQSKFKLLYFEQDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAVCAKSYEDTTQKLKDIEAQILRKRNELRQFESEYRKALARYQEVTERYTKEKQSVDELLKQRDGIHSSFTIVKSTNISGTASNLSNGSSSKFSGEDSKAESPDGEDGGSDGKDKSGKKKWFNLNLKGSDKRLI* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2600 415 CDD DnaJ 18 72 IPR001623 -
Aev09g2600 415 Gene3D DnaJ domain 4 100 IPR036869 -
Aev09g2600 415 Coils Coil 288 343 - -
Aev09g2600 415 MobiDBLite consensus disorder prediction 378 402 - -
Aev09g2600 415 PRINTS DnaJ domain signature 38 53 IPR001623 -
Aev09g2600 415 PRINTS DnaJ domain signature 20 38 IPR001623 -
Aev09g2600 415 PRINTS DnaJ domain signature 75 94 IPR001623 -
Aev09g2600 415 PRINTS DnaJ domain signature 55 75 IPR001623 -
Aev09g2600 415 SUPERFAMILY Chaperone J-domain 17 88 IPR036869 -
Aev09g2600 415 SMART dnaj_3 17 75 IPR001623 -
Aev09g2600 415 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Aev09g2600 415 MobiDBLite consensus disorder prediction 362 402 - -
Aev09g2600 415 Pfam DnaJ domain 18 80 IPR001623 -
Aev09g2600 415 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 4 413 - -
Aev09g2600 415 ProSiteProfiles dnaJ domain profile. 18 83 IPR001623 -
Aev09g2600 415 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 4 413 - -
Aev09g2600 415 MobiDBLite consensus disorder prediction 362 377 - -
Aev09g2600 415 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2600 Aev-Chr9 27248035 27251646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2600 9 90 C2H2 Transcription Factor Family AT1G74250 41.379 5.84e-13 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2600 09 27248035 27251646 Aev09g2600 09 27248035 27251646 ECH