Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2576 ATGGATTCTAACACTCCAACCTTCATTTTGAACTCTTCAGCTTTCCACTCTGTTTTCTATCATGACAAACAGGATGATGACCTGATTGATCTGGGTCTTAGCCTCAAAACTGTTCAACATGAAGCTTATCATTCTTCTGCCAACTTGTATGATGATGACCTCATGGATTGGCCTCACTCTAATCTCGACCTGAAGACTTCAAGCACATTGCATTCTAGATCTGTCCATGAGAATTTTGATGAAGAGATAGAGGGGGTTCAGAGCAAAGAGAGATGGGCTTATGTGAAGGTCAATATGGATGGAATTACCATTGGTAGGAAAATTTGTATGCTTGATCATGCAGGATATTCCAGTCTTGCAATCCAACTAGAAGACATGTTTGGAAGCCAATGCCTTTCAGGTTTGAGATTGTTCCAATCAGGGTCAGAGTACACATTGTTCTACAAGGATAGGGAAGACAATTGGAGGACTGTTGGTGATGTTCCATGGAAAGAGTTTGTAGAATGTGTGAAGCGTTTAAGGATTGCAAGAAAGAATGCAGGAGGATTTGCTTCATGTTCATCTAGATACAACTAA 576 0.4045 MDSNTPTFILNSSAFHSVFYHDKQDDDLIDLGLSLKTVQHEAYHSSANLYDDDLMDWPHSNLDLKTSSTLHSRSVHENFDEEIEGVQSKERWAYVKVNMDGITIGRKICMLDHAGYSSLAIQLEDMFGSQCLSGLRLFQSGSEYTLFYKDREDNWRTVGDVPWKEFVECVKRLRIARKNAGGFASCSSRYN* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2576 191 Gene3D - 86 187 - -
Aev09g2576 191 SUPERFAMILY CAD & PB1 domains 92 175 - -
Aev09g2576 191 Pfam AUX/IAA family 80 178 IPR033389 -
Aev09g2576 191 ProSiteProfiles PB1 domain profile. 92 180 IPR000270 GO:0005515
Aev09g2576 191 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 180 IPR003311 GO:0005634|GO:0006355
Aev09g2576 191 PANTHER AUXIN-RESPONSIVE PROTEIN IAA34 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2576 Aev-Chr9 27127332 27128284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2576 87 175 B3 DNA Binding Superfamily AT1G19220 35.955 1.48e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Aev09g2576 AUX_IAA 1.8e-23 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2576 09 27127332 27128284 Aev09g2576 09 27127332 27128284 ECH