Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0547 ATGCAAGACCCAACAATTACAGCATTTCAATTAATCCAAAGCATGAAGCCTCTGTCTCATCATCACAACTTCCAAACAGAACAAGAACAACAGCAAAATCAACAACAAGAACAACTCAAGTGTCCTCGTTGTGACTCAACAAACACCAAATTCTGTTACTACAACAACTACAATCTCTCTCAGCCACGCCATTTCTGCAAGAACTGTCGAAGGTATTGGACCAAAGGTGGTGCTCTTAGAAACATCCCAGTTGGTGGTGGTTCCAGAAAAACCACCAAAAGATCATCTTCATCATCAACATCAAGCACCAAACGCCATGTTCAACCACCAGCAGCAGCAGGAACAGCATCATCAATCTCTGCATCAAATTCTGCTACTGTTAATGTTTCCGGGTCAGGTCCGACCCGGGTGGAACAAGATCGTGGTGTGATGAACATTGGAGGGAGTTTTAGTTCCCTTATGGGATCAAGTGGGCACTTTGGAACACTTTTGGAGGGTCTGAATTCAAATGGGTCAGGGATGAAAATGGTGCAAGTGAGTGGATTTGGTGGGAATTTTGGTTCTGATGAGCCGGGTTTGAATTCGGGTTCGGGTCGGAATCCGGGTTTGGATATTATGCAGAGTCATGGAAATTCTGAGGGTTTTCTTTCTTTGCAGAATGGTGATGGTGGTCATGGTTGGTCTGATCTTGCAATATACACACGTGGCTCAAGTTTTCTGTAG 723 0.444 MQDPTITAFQLIQSMKPLSHHHNFQTEQEQQQNQQQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKTTKRSSSSSTSSTKRHVQPPAAAGTASSISASNSATVNVSGSGPTRVEQDRGVMNIGGSFSSLMGSSGHFGTLLEGLNSNGSGMKMVQVSGFGGNFGSDEPGLNSGSGRNPGLDIMQSHGNSEGFLSLQNGDGGHGWSDLAIYTRGSSFL* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0547 240 MobiDBLite consensus disorder prediction 194 217 - -
Aev09g0547 240 MobiDBLite consensus disorder prediction 88 135 - -
Aev09g0547 240 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Aev09g0547 240 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Aev09g0547 240 PANTHER DOF ZINC FINGER PROTEIN DOF3.1-LIKE 34 239 - -
Aev09g0547 240 MobiDBLite consensus disorder prediction 80 140 - -
Aev09g0547 240 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Aev09g0547 240 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 34 239 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0547 Aev-Chr9 4898396 4899118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0547 1 164 C2C2-Dof Transcription Factor Family AT1G51700 53.293 8.36e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev09g0547 zf-Dof 4.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0547 - - qlo:115988764 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0547 09 4898396 4899118 Aev09g0547 09 4898396 4899118 ECH
Aev10g1642 10 18903419 18906245 Aev09g0547 09 4898396 4899118 PCT