Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2258 ATGGTGATGACATGCACAACAAGGCCTTCTTCTTCTTCAATGATAGGAGGAGGAGGAGAGAGGAGGCTAAGGCCACCACATGACCAATCCCTGAAATGTCCAAGATGTGACTCAACACACACCAAATTCTGCTACTACAACAACTACAGCCTCTCCCAACCAAGGTACTTCTGCAAGACTTGCAGAAGGTACTGGACCAAAGGTGGAACCCTCAGGAACATTCCTGTTGGTGGTGGCTGCAGAAAGAACAAAAAAGTCTCTTCCAAAAAATCCAACACCAATAACAATAATGACCCTTTATTACCACCTAATACTAGTAGTAATAGCCAACAAAATCATCATCTCCAACTTCACCACAATGCAGGGCCTTCTAGTTACATTATTAACCATCATCATCACAAAGATCTTCAACTTTCTTTCCCTGATGTTCAATTTAATTCCCACCTCAGTAATATTCTAGGGAATAATAATAATAGTAATTTCATGGAGAGCAAGTATGGTGGTATTGGGGCTAATATTAATGGCATGCTTGAAAATCCTGTTATTAGGCCTATTGATTTCATCATGGAGAGCAAATTGGAGGGCATAATTGGGAATAGTTCTAGGAATTTTGACTTTTTGGGAATGGTGAAATGGGTATGGCTAATTACTCCTCCTCATCATCATCATCATAGTGCATCATTTGGTGGCATGTCCCTTGATGGTGGAAGCAATAATGGGGTGAATTTTATGATGGACTCATCATCATCATCATCATGTCAGAGGCTGATGCTGCCATATGATGCTGGTACTAGTGAGGACCATAACAACAATAATGCCCCAATTGATGTGAAGCCAAACCCTAAGCTTTTGTCTCTTGAGTGGCAGCAAGAACAGGGCTGCTCTGATGCAGGGAAAGACTCATTTGGGTATGGATCTTGGTCTGCCATGATGAATGGCTATGGATCTTCTGCAACAAACCCTCTTGTCTAA 972 0.4167 MVMTCTTRPSSSSMIGGGGERRLRPPHDQSLKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSNTNNNNDPLLPPNTSSNSQQNHHLQLHHNAGPSSYIINHHHHKDLQLSFPDVQFNSHLSNILGNNNNSNFMESKYGGIGANINGMLENPVIRPIDFIMESKLEGIIGNSSRNFDFLGMVKWVWLITPPHHHHHSASFGGMSLDGGSNNGVNFMMDSSSSSSCQRLMLPYDAGTSEDHNNNNAPIDVKPNPKLLSLEWQQEQGCSDAGKDSFGYGSWSAMMNGYGSSATNPLV* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2258 323 Pfam Dof domain, zinc finger 28 85 IPR003851 GO:0003677|GO:0006355
Aev08g2258 323 ProSiteProfiles Zinc finger Dof-type profile. 31 85 IPR003851 GO:0003677|GO:0006355
Aev08g2258 323 PANTHER DOF ZINC FINGER PROTEIN DOF5.6-LIKE 13 315 - -
Aev08g2258 323 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 13 315 IPR045174 GO:0003700|GO:0006355
Aev08g2258 323 MobiDBLite consensus disorder prediction 89 114 - -
Aev08g2258 323 MobiDBLite consensus disorder prediction 1 31 - -
Aev08g2258 323 ProSitePatterns Zinc finger Dof-type signature. 33 69 IPR003851 GO:0003677|GO:0006355
Aev08g2258 323 MobiDBLite consensus disorder prediction 76 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2258 Aev-Chr8 21802688 21803748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2258 1 323 C2C2-Dof Transcription Factor Family AT5G62940 39.459 1.32e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev08g2258 zf-Dof 2.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2258 - - gmx:778107 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2015 01 24848310 24849892 Aev08g2258 08 21802688 21803748 PCT