Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2057 ATGCTGGAAAATAAGGACCCTGCGATTAGGCTATTTGGCCAGAAGATTCCCTTTCCTGCGGATGCTTTGGCTTCTGCCATTGTCGCTGACGACGCATCGCCAGCGACGATGGATGTTGACCAGAAGGAGGAGGAAGAAGAAGAGGAGAATCAACAAGAAGAAGAAGAAGGAAGAGAAGTTGTTGGTGAATTAAGGGATGATGAAGAGGAGACAGAACAAGGAGACATCAAGGATCCTCCAGCTGATGAAGTTACTGAGAAAAAGAAAGAGGCTGATTCTCCTCCAAATGATGCAGAGACTAATAACAACAAGAAGAAGAAGGATTCAGATGCAATTCAGAACCCAAAAACACCATCCATAGATGAAGAAACTGCGAAATCAAAGAATGGAAAGTCAGAGAATGAGCAAAATGATGCAAACAACAACAATTCACAGCAAGAGAAGACTCTAAAGAAGCCTGATAAACTGATTCCGTGTCCACGCTGCAATAGCATGGACACAAAATTCTGTTACTACAACAACTACAACGTCAACCAGCCGCGCTACTTCTGCAAAGCGTGTCAGCGGTACTGGACTAATGGTGGAACCATGAGGAATGTGCCAGTTGGGGCAGGGAGGAGGAAGAACAAGAACAGCGCCGCGGCGTCACACTATCGCCATATCACAATCTCTGAGGCTCTTCAAGCAGCTAGAATTGATGCTCCTAATGGAACTCATATCCCAAATTTGAAAACCAATGGTAGAGTCCTGAGCTTTGGAATGAATCCACCAATTTGTGATTCCATGGCATCTGTCCTTAATCTTGCAGATAAGAATATGACCCGAATCGGGTTTCATGGCATTGAGGATCAAAGGGCTTGCAAAAGTGTGGAAAATGGTGATGATTGCTCAAGTGGATCTTCCATTACAGTTTCAAATTCAATTGAGGAAACCGGAAAAACCACAACACCAACAAAAGAGCCTATAGTACAAAGCAATGGTTTTCTTGCTCCTCAAGTTACATGCATCCCTAGTGTTCCCTGGCCTTATCCATGGAATTCTGCTCTGTGTCCTCCAGGATTTCCAATTTCATTCTACCCTGCAGCCTTTTGGAATTGCGGTATGCCGGCGGCGAATTGGAACGTTCCCTGGTTTCCCTCACATCCTCCTCATACAAAGGCTCCAAACTCTAGCCCCAATTCTCCAACTCTAGGGAAGCACTCGAGGGACGATGACACGGCTAAACAGGACTATTCTTCGCAGAAGGAAGAAGAACCTCCAAGGCAGAAAAATTGGTGTGTCTTAGTTCCTAAAACTTTGAGAATCGATGACCCCAGCGACGCGGCAAAGAGTTCTATATGGGCAACACTAGGAATCAAGAATGAATGTGTGAGTGGGGGAGGCATGTTCAAGGCCTTCAAATCAAAGAAAGAAGAGAAGAATCATGTTGTTGAAGCCTCTCCAGTATTGAGAGCTAACCCTGCAGCTTTATCTAGATCCCTTAATTTTCATGAGAATTCCTAA 1503 0.4478 MLENKDPAIRLFGQKIPFPADALASAIVADDASPATMDVDQKEEEEEEENQQEEEEGREVVGELRDDEEETEQGDIKDPPADEVTEKKKEADSPPNDAETNNNKKKKDSDAIQNPKTPSIDEETAKSKNGKSENEQNDANNNNSQQEKTLKKPDKLIPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTNGGTMRNVPVGAGRRKNKNSAAASHYRHITISEALQAARIDAPNGTHIPNLKTNGRVLSFGMNPPICDSMASVLNLADKNMTRIGFHGIEDQRACKSVENGDDCSSGSSITVSNSIEETGKTTTPTKEPIVQSNGFLAPQVTCIPSVPWPYPWNSALCPPGFPISFYPAAFWNCGMPAANWNVPWFPSHPPHTKAPNSSPNSPTLGKHSRDDDTAKQDYSSQKEEEPPRQKNWCVLVPKTLRIDDPSDAAKSSIWATLGIKNECVSGGGMFKAFKSKKEEKNHVVEASPVLRANPAALSRSLNFHENS* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2057 500 MobiDBLite consensus disorder prediction 27 157 - -
Aev08g2057 500 MobiDBLite consensus disorder prediction 383 423 - -
Aev08g2057 500 Pfam Dof domain, zinc finger 155 211 IPR003851 GO:0003677|GO:0006355
Aev08g2057 500 Coils Coil 36 63 - -
Aev08g2057 500 MobiDBLite consensus disorder prediction 77 112 - -
Aev08g2057 500 PANTHER CYCLIC DOF FACTOR 2 1 499 IPR045174 GO:0003700|GO:0006355
Aev08g2057 500 MobiDBLite consensus disorder prediction 398 422 - -
Aev08g2057 500 ProSiteProfiles Zinc finger Dof-type profile. 157 211 IPR003851 GO:0003677|GO:0006355
Aev08g2057 500 ProSitePatterns Zinc finger Dof-type signature. 159 195 IPR003851 GO:0003677|GO:0006355
Aev08g2057 500 PANTHER CYCLIC DOF FACTOR 1 1 499 - -
Aev08g2057 500 MobiDBLite consensus disorder prediction 40 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2057 Aev-Chr8 19666235 19668822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2057 1 498 C2C2-Dof Transcription Factor Family AT3G47500 46.154 4.32e-126 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev08g2057 zf-Dof 5.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2057 - - gsj:114409713 604.364