Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1614 ATGAGGAAGAAGCTTGATACCCGTTTTCCAGCCGCTAGGATAAAGAAGATTATGCAAGCAGATGAGGACGTTGGAAAGATAGCACTTGCAGTTCCTGTTTTAGTTTCTAAAGCTTTAGAGCTATTTTTGCAAGATCTATGTGACCGTACTTATGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAATTCATTGCATTTAAAACATTGTGTACAAAGCTATAATGTCTTTGACTTTCTGAGGGACGTTGTGAGCAGGGTACCTGACTATAGCCATGGCCATGGCCATACAGATGCTGGCTCCGATGAGCGAGCAATTATGAAAAGAAGGAAATTTACTGGTGATGATTACAATGACAGTGATGAAGAGACTAAGAGGAGCAAGATGTATGAATTGAGCCACACTGGCAGTACTGGTAGGGGAAGAGGCCGAGGCAGAGGAAGAGGCCGCGGTCGAGGGGCTCGAACTGTAGAAAGAGAAGCATACCGCCAGGAAGCTGAAACTGAGCCTCGCACATCAGTTCAGCTGGTCAGCCAACACAACAGTAATACAACAAATGTGGTAATATTTAATGCTCCAGAGACAAAGGAGCCACCAAAGGAGGATATTCTAGTCCCAGTCGAAAGCTCTGAGCCACTCCCTAATATCGATCCGAATGCCAACAACGCGAACCAAAATGAGGTCAAAACCGCTGATGCAGCGGATAATGCTGCATTGCCTGAACCTGCGACGGAGAGCAAGCATGAAGAAATTCCTGGTTGGTCCCTTTCTGATGTGGACAAGATGGCAATTGGCTCGATGCAGCTTGCACAACTTAGTGGTCGATTAGAAGAGGAGGAAGATGATTATGATGAGGAAGGGTGA 864 0.4572 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYSHGHGHTDAGSDERAIMKRRKFTGDDYNDSDEETKRSKMYELSHTGSTGRGRGRGRGRGRGRGARTVEREAYRQEAETEPRTSVQLVSQHNSNTTNVVIFNAPETKEPPKEDILVPVESSEPLPNIDPNANNANQNEVKTADAADNAALPEPATESKHEEIPGWSLSDVDKMAIGSMQLAQLSGRLEEEEDDYDEEG* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1614 287 SUPERFAMILY Histone-fold 4 94 IPR009072 GO:0046982
Aev08g1614 287 PANTHER HISTONE SUPERFAMILY PROTEIN 1 286 - -
Aev08g1614 287 MobiDBLite consensus disorder prediction 209 257 - -
Aev08g1614 287 MobiDBLite consensus disorder prediction 114 130 - -
Aev08g1614 287 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Aev08g1614 287 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Aev08g1614 287 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 286 - -
Aev08g1614 287 MobiDBLite consensus disorder prediction 114 180 - -
Aev08g1614 287 MobiDBLite consensus disorder prediction 151 167 - -
Aev08g1614 287 MobiDBLite consensus disorder prediction 214 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1614 Aev-Chr8 12020134 12031095 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Aev08g1614 CBFD_NFYB_HMF 2.1e-19 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1614 08 12020134 12031095 Aev08g1614 08 12020134 12031095 ECH