Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1596 ATGGCGGAGCAGACGAGCGCCGCCGTGAACGACGGCGAATTAGAACCTAAAAAGGACGAACATTACAACAACAACAATGACGACAACAATAATAATAAGAAGAGCTCAGATCCAGACTTGTTCTGCTGCTTGTTGCAGCCCGCCACCGCCGACAGCGATCCCGAGTACATTGGCATCCGCCGTCTCCTCCTTCGCCGGAAGGCCGAGGCTGGAGCTATCCGCCGTAATGATTGGAGATGCAATGGAAAAACTTATGTGGCATACAGGAATTACATATGTAGACCAAGGGACTGGGAAAGTTCACGTGTCCCAAGCCTCCAGAGTACTCCAGGAAACAGTGGGCGATGGATTCCGCCTCAAAGTCCACTCTCCCGTTGGTCTGAGGTGGACAGCTGGAGTTCTGGGCGGGATCTGCAAAGTGTGAATCCAATTTCCAATCATAGAACAAGTTTCAGCTCAAGTGCAAGTGATTCTGATCGTTCACGGAATCGGGGAATTGAGCCTGCCTATTCCTTTGTTGGCATGCATTGCATCTTTGATCAGTGCAAAGCCTCTGTAACGGTGCTAAAGTTTGGGCACATGAGTTCTGATCTACTAGCATATGGAGCATCAGATGGAACCTTGACTGTGTGCACTGTTTCTGAGAATCCTTCACTCATCAAACAGTTAAATGGGCATTCCAAAGATGTTACAGATTTTGATTTTACATCAAACAATCAGTACATTGCATCGTCTTCATTGGATAAAACTGTGAGGGTATGGGAGATAGCGAAAGGCATTTGCATACGGGTGATATACGGAGTTTCTTCACAATTGTGCATCCGTTTTCACCCTGTAAATAACAACTTCCTTTCAGTTGGCAATGCAAATAGGGAAATCAATGTGTTCAACTTTAGCACTGGAAGGATAATTAATAAATCAGTATTTGACAGTGAAATTACTGCTATGGACCATGATCATACTGGACATCTCATCTTTTGTGGGGATGGACAGGGATGTATATACTCAGTAAATATGAACTCCCACACAGGTGCATTATCTCGCTCTCATCGTCATCGAAGTAGCAGCAGACACAAATCTCCTGTCACAACAGTACAGTATCGGAGTTTCTCTTTACTGGCTGGAGGGCCGGTGTTGTTGACATGCACTCAGGATGGAAATCTTTCTTTCTTCAGTGTGGCTTTGGAGATTAAAGGATATTTAACTCTTAGATGCTCACTCAAGTTAGCGCCACGTATACACAAAATCCAAGCTTCTTTCTGCCCTCTTCTTTCCCTTGAAAAAGGAGAGTTCATAGTTTCTGGAAGTGAGGACTCAAATGTCTATTTCTATGATTTAACTCGGCCAAAGCATACATGTGTAAACAAGCTACAGGGTCATCGGTTTCCTGTTATGGATATTGCTTGGAACCATGGAGAGAATCTTTTGGCTTCATCAGATTTTTATGGCATAGTAATTGTTTGGAAGAGAGCAAGAACGCATGAAAACAAGAATACATAG 1500 0.4407 MAEQTSAAVNDGELEPKKDEHYNNNNDDNNNNKKSSDPDLFCCLLQPATADSDPEYIGIRRLLLRRKAEAGAIRRNDWRCNGKTYVAYRNYICRPRDWESSRVPSLQSTPGNSGRWIPPQSPLSRWSEVDSWSSGRDLQSVNPISNHRTSFSSSASDSDRSRNRGIEPAYSFVGMHCIFDQCKASVTVLKFGHMSSDLLAYGASDGTLTVCTVSENPSLIKQLNGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIAKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANREINVFNFSTGRIINKSVFDSEITAMDHDHTGHLIFCGDGQGCIYSVNMNSHTGALSRSHRHRSSSRHKSPVTTVQYRSFSLLAGGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLAPRIHKIQASFCPLLSLEKGEFIVSGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVMDIAWNHGENLLASSDFYGIVIVWKRARTHENKNT* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1596 499 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 223 256 - -
Aev08g1596 499 MobiDBLite consensus disorder prediction 101 123 - -
Aev08g1596 499 MobiDBLite consensus disorder prediction 137 159 - -
Aev08g1596 499 ProSitePatterns Trp-Asp (WD) repeats signature. 242 256 IPR019775 -
Aev08g1596 499 Gene3D - 99 273 IPR015943 GO:0005515
Aev08g1596 499 ProSiteProfiles Trp-Asp (WD) repeats profile. 457 489 IPR001680 GO:0005515
Aev08g1596 499 PANTHER WD REPEAT-CONTAINING PROTEIN 13 19 493 - -
Aev08g1596 499 Gene3D - 274 406 IPR015943 GO:0005515
Aev08g1596 499 MobiDBLite consensus disorder prediction 12 27 - -
Aev08g1596 499 MobiDBLite consensus disorder prediction 137 162 - -
Aev08g1596 499 Pfam WD domain, G-beta repeat 219 254 IPR001680 GO:0005515
Aev08g1596 499 Pfam WD domain, G-beta repeat 453 489 IPR001680 GO:0005515
Aev08g1596 499 SUPERFAMILY WD40 repeat-like 178 490 IPR036322 GO:0005515
Aev08g1596 499 SMART WD40_4 348 392 IPR001680 GO:0005515
Aev08g1596 499 SMART WD40_4 172 212 IPR001680 GO:0005515
Aev08g1596 499 SMART WD40_4 300 338 IPR001680 GO:0005515
Aev08g1596 499 SMART WD40_4 409 445 IPR001680 GO:0005515
Aev08g1596 499 SMART WD40_4 216 255 IPR001680 GO:0005515
Aev08g1596 499 SMART WD40_4 258 297 IPR001680 GO:0005515
Aev08g1596 499 SMART WD40_4 450 489 IPR001680 GO:0005515
Aev08g1596 499 ProSiteProfiles Trp-Asp (WD) repeats profile. 223 264 IPR001680 GO:0005515
Aev08g1596 499 Gene3D - 416 498 IPR015943 GO:0005515
Aev08g1596 499 PANTHER WD REPEAT PROTEIN 26-RELATED 19 493 - -
Aev08g1596 499 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1596 Aev-Chr8 11750778 11768540 Dispersed/Transposed