Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1493 ATGGCTGCCATTGCCTCCTTCCACTTCCATTTCCCATGCCCAACCATTTCTTCTCGTTCCTCCTTCCATCATCATCATCATCATAACCTTCAACTTTGGGCCTCTCCCTCCTTCTCAGCACCATCTGCAACTACCCAAACCCAAACCCTAACCGTTGCTTCCCGCCAATACATCTGCATGCGCAGCAGCAGCAGAGCTGGCCTCATCGCTTCAAGTGTTTCTCTCAACAGACAGCCCATGGTTCCTCCTTACAATGTTTTGATTACTGGCTCCACCAAAGGAATAGGGTATGCTTTGGCTAAAGAGTTTCTCAAAGCTGGTGACAATGTCATAATTTGCTCAAGATCATATGAAACTGTCGAGAATGTTGTCCAGGGTCTGAGAGCAGAATTTTGTGAGCAGCATGTGTGGGGAACTAAATGTGACGTTAGAAATGGAGAGGATGTGAAGAATTTGGTTTCATTTGCTAAGGAAAAACTGAAATATGTTGACATATGGATTAACAATGCTGGATCAAATGCATATAGCTATAAACCGCTTGCTGAGGCCTCAGACGAAGATCTTATTGAGGTGGTTACAACAAATACACTTGGTTTGATGATATGTTGTCGAGAGGCAATAAAGATGATGGTGAGCCAGTCTCGTGGGGGTCATATTTTCAATATTGATGGAGCAGGTTCTGATGGAAGACCAACCCCAAGGTTTGCTGCATATGGAGCAACAAAAAGAAGTGTTGTGCATCTAACAAAGTCATTACAGGCAGAATTGCAGATGCAAGATGTTAAAAATGTCATGGTGCATAACCTTTCGCCAGGAATGGTCACAACGGATCTCCTCATGTCTGGTGCTAATACAAAGCAGGCAAAGTTTTTCATTAATGTCTTGGCTGAACCAGCCGAAGTGGTTGCTGAATACCTGGTTCCAAATATTAGATCCATACCTGCCAAAGGATCAATGAAGCCAACCTACATTCGATTCCTCACTGGTTTGAAAGCCTATTCCCAGATATTTTCAAGGTTAGCCTTCGGGGCAAGAAGGAACCGGCATATTCTTGAAGACTGA 1062 0.4388 MAAIASFHFHFPCPTISSRSSFHHHHHHNLQLWASPSFSAPSATTQTQTLTVASRQYICMRSSSRAGLIASSVSLNRQPMVPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSYETVENVVQGLRAEFCEQHVWGTKCDVRNGEDVKNLVSFAKEKLKYVDIWINNAGSNAYSYKPLAEASDEDLIEVVTTNTLGLMICCREAIKMMVSQSRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVMVHNLSPGMVTTDLLMSGANTKQAKFFINVLAEPAEVVAEYLVPNIRSIPAKGSMKPTYIRFLTGLKAYSQIFSRLAFGARRNRHILED* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1493 353 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 225 253 IPR020904 GO:0016491
Aev08g1493 353 PRINTS Glucose/ribitol dehydrogenase family signature 238 257 IPR002347 -
Aev08g1493 353 PRINTS Glucose/ribitol dehydrogenase family signature 211 227 IPR002347 -
Aev08g1493 353 PRINTS Glucose/ribitol dehydrogenase family signature 262 279 IPR002347 -
Aev08g1493 353 PRINTS Glucose/ribitol dehydrogenase family signature 85 102 IPR002347 -
Aev08g1493 353 PRINTS Glucose/ribitol dehydrogenase family signature 161 172 IPR002347 -
Aev08g1493 353 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 34 353 - -
Aev08g1493 353 Pfam short chain dehydrogenase 86 281 IPR002347 -
Aev08g1493 353 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 238 257 IPR002347 -
Aev08g1493 353 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 217 225 IPR002347 -
Aev08g1493 353 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 172 IPR002347 -
Aev08g1493 353 Gene3D - 84 319 - -
Aev08g1493 353 CDD SDR_c 86 307 - -
Aev08g1493 353 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 85 304 IPR036291 -
Aev08g1493 353 PANTHER CHLOROPHYLL(IDE) B REDUCTASE NOL, CHLOROPLASTIC 34 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1493 Aev-Chr8 10461903 10474815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1493 86 278 Acyl Lipid Metabolism Gene Families AT1G24360 29.293 1.78e-14 71.6