Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1428 ATGAGCCCTCCAGCTGCACCCAACATGGATGAGGGCAAACCTTTTGTTGCCACCGTCGATAATGGCGACCAAGTCGAGTCTCGATTAGCACACTTTTGCAAGAATGAGCTAGCGTTGGATGAGAAAAGCTGTAAAGAAGCAATGAATCTGTTTGCAGAAACCAAACATATTCTACTGGCAAATGTTTCTTCAATGGGGAATGGAATGTCTGAAGAAGTAGAGCGGTATTGGTTTGCTTTTATTTTATACTCTATCAAGAGACTGGCTCATAATAATGAGGAGAGTGAGAAGGAAGAGTCTGATAACATTGGGCCTACCTTGTGCCGTATATTGAGAGCAGCTAAGCTCAACATTTCAGATTTTTTCAAAGAACTTCCTCAGTTTGTTGTTAAGGCTGGTCCAGTTATAAGTAATGTGTACGGCTCAGATTGGGAGAGCAAGCTTGAGGCAAAGGAAATGCATGCCAATGCTATTCACCTAAACATTCTTAGCAAGTACTATAAGCGTGTATTTGGAGAGTTCTTTGTTTTAACTGATGCCAACGTTGTAAATAACTCATCTGAAACTGTTCATGCATCCGAGTACCATCGCTTTGGATGGTTACTTTTCTTGGCACTCCGTGTACATGCTTTCAGCCGTTTCAAAGACTTGGTGACTTGCACAAATGGTTTAATTTCAATCTTGGCGATCTTGATTATTCATGTTCCTGCTCGGTTTCGGAATTTCAACATTCATGACTCTTCACGCTTTGTTAAGAAGAGTAACAAAGGTGTTGATCTCCTTGCATCTCTTTGCAACATTTATAACAATTCAGAAGATGAGTTGAGGAAAACCATGGAGAAAGCCAATAATTTAATTGCAGAGATATTGAAGAAGAAGCCTTGTTCGGCATCTGAATGCGAGATTGAAAACCTGGAGAATTTTGATACAGATGGTTTAATCTATTTTAAAGATCTGATGGAGGAGTCATCGCTGCCATCCAGTTTAAATATCCTAGAGAAAGATTATGATTGCATTATTCGCAACAAGGGTGAGCTGGATGAGAGATTGTTCATTAATGAGGATGACAGCTTGCTAGCTTCAGGGAGTTTGTCTGGAGGTTCTGTTTCTGCTGGTGGTGTAAAGAGGAAACTTGACTCAATGGCATCACCTGCAAAGACTGTTACAAGTCCACTCTCGCCCCACCGCTCTCCTGCATCTCATGCTAATGGCATTCCAGGTAGTGCAAATTCAAAGATGGCAGCCACTCCTGTCAGCACAGCAATGACTACTGCAAAGTGGCTTCGTACTCACATTTCCCCACTTCCATCAAAGCCCTCTCAGGAACTGGAGCGTTTCTTAACATCATGTGATAGGGATGTTACCAGTGACGTGGTGCGCAGAGCACATATCATATTGCAGGCTATATTTCCTAGTAGTCCTCTTGGAGAACGATGTGTAACAACTTGGAGTCTACAAAGTGCAAATCTGATGGACAATATTTGGGCAGAACAGCGGAGATTAGAAGCCCTGAAGCTATACTATAGGGTATTAGAAGCAATGTGCAGAGCAGAAGCCCAAATACTTCATGCAACTAATTTAACATCGTTACTAACTAATGAGAGGTTCCATCGATGTATGCTTGCATGTTCTGCAGAGTTAGTCCTGGCAACTCACAAGACTGTAACAATGCTATTTCCTGCAGTACTGGAGAGGACTGGAATTACAGCTTTTGATCTTAGCAAGGTGATTGAAAGTTTCATTAGACATGAAGAATCTCTTCCAAGAGAATTGAGGCGACATCTGAATTCATTGGAAGAACGACTTCTGGAGAGCATGGTATGGGAAAAAGGCTCCTCAATGTATAATTCTTTGGCAGTTGCTAGACCTGCCCTTGCTTCAGAAATAAATCGTCTTGGACTATTAGCTGAACCTATGCTATCATTGGATGAAATTGCAATGCATATTAACTTTTCTTGTGGAGGGCTGCCTCCTGTGCCTTCCTTGCCTAAGCTTGAGACAGCACCAACTCAGAATGGGGATACCAGATCACCAAAGCGACTCTGTACAGAATATCGAAATGTGCTAGTGGAGCGAAATTCTTTTACTTCACCCGTGAAAGAACGGCTTCTTCCCTTCAGCAACCTTAAGTCAAAGCTAGCCCCACCTCCTTTGCAGTCTGCATTTGCCAGTCCAACAAAACCAAATCCAGGAGGCGGAGGGGAAACGTGTGCGGAAACTGGGATCAACATCTTTTTCAGCAAGATCATCAAGTTGGGAGCAGTCAGAATAAGTGGCATGGTTGAAAGGCTACAATTATCTCAGCAGATAAGGGAAAATGTATACTGTCTTTTCCAGCAAATCCTAAATCAAATGACATCTCTCTTCTTCAACCGCCATATTGACCAAATCATTCTGTGTTGCTTCTATGGAGTTGCAAAGATTTCTCAACTCAACCTAACTTTTAGGGAGATCATATACAACTACAGAAAGCAACCACAGTGCAAACCACAAGTATTTCGCAGTGTGTTTATTGATTGGTCATTGGCACGCCGCAATGGGAGAACAGGACAGGAGCATGTCGACATCATTACATTTTACAATGAAATATTCATCCCATCTGTTAAGCCGCTGCTAGTTGAACTTGGGCCTGGGGGGGGAACAGCTATAAAAAATAACCGGATGCCTGAAGTTAATATTAAAAATGATGCTCAATGTCCTGGTTCTCCTAAAATATCTCCTTTCCCTAGTCTTCCGGATATGTCACCAAAAAAGGTGTCTGCTACACACAATGTGTACGTCTCTCCACTCCGATCGTCTAAGATGGATGCTCTAATATCGCATAGCTCAAAAAGCTATTATGCATGTGTTGGGGAGAGTACTCATGCATATCAGAGTCCTTCAAAAGATCTGACTGCCATCAATAACCGTCTGAATGGCAACCGGAAGGTAAGAGGCTCCCTCAATTTCGACGATTTGGATGCCGGCTTGGTTAGTGACTCGATGGTCACAAACAGCCTCTACCTGCAGAACGGAAGCTGTGCATCATCGTCAGGCGCGCCGTTGAAGACTGAGCAACCTGACTCTTAA 3069 0.4282 MSPPAAPNMDEGKPFVATVDNGDQVESRLAHFCKNELALDEKSCKEAMNLFAETKHILLANVSSMGNGMSEEVERYWFAFILYSIKRLAHNNEESEKEESDNIGPTLCRILRAAKLNISDFFKELPQFVVKAGPVISNVYGSDWESKLEAKEMHANAIHLNILSKYYKRVFGEFFVLTDANVVNNSSETVHASEYHRFGWLLFLALRVHAFSRFKDLVTCTNGLISILAILIIHVPARFRNFNIHDSSRFVKKSNKGVDLLASLCNIYNNSEDELRKTMEKANNLIAEILKKKPCSASECEIENLENFDTDGLIYFKDLMEESSLPSSLNILEKDYDCIIRNKGELDERLFINEDDSLLASGSLSGGSVSAGGVKRKLDSMASPAKTVTSPLSPHRSPASHANGIPGSANSKMAATPVSTAMTTAKWLRTHISPLPSKPSQELERFLTSCDRDVTSDVVRRAHIILQAIFPSSPLGERCVTTWSLQSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQILHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVARPALASEINRLGLLAEPMLSLDEIAMHINFSCGGLPPVPSLPKLETAPTQNGDTRSPKRLCTEYRNVLVERNSFTSPVKERLLPFSNLKSKLAPPPLQSAFASPTKPNPGGGGETCAETGINIFFSKIIKLGAVRISGMVERLQLSQQIRENVYCLFQQILNQMTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFIDWSLARRNGRTGQEHVDIITFYNEIFIPSVKPLLVELGPGGGTAIKNNRMPEVNIKNDAQCPGSPKISPFPSLPDMSPKKVSATHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRGSLNFDDLDAGLVSDSMVTNSLYLQNGSCASSSGAPLKTEQPDS* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1428 1022 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 14 1009 IPR028309 GO:0006357|GO:0051726
Aev08g1428 1022 Coils Coil 268 292 - -
Aev08g1428 1022 SUPERFAMILY Cyclin-like 740 910 IPR036915 -
Aev08g1428 1022 Pfam Domain of unknown function (DUF3452) 105 234 IPR024599 -
Aev08g1428 1022 SUPERFAMILY Cyclin-like 424 620 IPR036915 -
Aev08g1428 1022 Gene3D - 195 353 - -
Aev08g1428 1022 PANTHER BNACNNG22930D PROTEIN 14 1009 - -
Aev08g1428 1022 MobiDBLite consensus disorder prediction 380 411 - -
Aev08g1428 1022 Pfam Retinoblastoma-associated protein B domain 742 869 IPR002719 GO:0005634|GO:0051726
Aev08g1428 1022 Pfam Retinoblastoma-associated protein A domain 416 618 IPR002720 GO:0005634|GO:0051726
Aev08g1428 1022 SMART DUF3452_2 88 234 IPR024599 -
Aev08g1428 1022 Gene3D - 703 910 - -
Aev08g1428 1022 Gene3D - 419 608 - -
Aev08g1428 1022 MobiDBLite consensus disorder prediction 383 411 - -
Aev08g1428 1022 SMART RB_A_2 416 618 IPR002720 GO:0005634|GO:0051726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Aev08g1428 RB_A 2.9e-64 CL0065