Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1366 ATGCCTTCTTATGGGGAACTTTTGGATCAAAATTGTTTCCTAAAGTTTATATTGATGATGATTTTACCCTTCCTTGTGCTCCTAATATGGGCAGAAAAAAAAGTAGCCAATTCCAATAAAGGGGAGGAACTTGTGGGGACTAGTAGTAGTGAAATAGAGCAATTGTTTGAAGAGGATTCGGAGCTTATGAGACATGGAGGTTTGAGGGCATACTGTGCTTGCTCCTTCTGTGGCAAATTAAGCCATGTAACCATAACTTGCTCGCGATGCAAAGCTGCTTTATATTGCTCAAAGGCTTGTCATGTTACGCACTGGACATTTTGGCATAAATACGAATGCGTTGGATCAGAGGCTGATGAAGGTCACGAGGGATCATCACCCTCTCATGGAACTCATTTCCTCCTCTTGGACTCTAAAAAGGAAAGAGAGGAGGGAGAGGAAGCCTATATTAAAGCAAAAGAAGGTGAAGAAGAGTACACTGATGGAACACCGAAATCTCAGCTTGCAATTGTCAGTGGTCACGATCGCTGCGCTGTGTGTGGCAATCCGAGTACTAAAAAGTGCTCAAGATGCAAAGCTATCAAATACTGCTCAAAAACATGTCAACATTTCGACTGGAGATCAGGGCATAATTTTCGTTGCGTTGTTGAGAAAGAAAATTCGGCTCAAGCATTAACAGATCATCAAGAAGTGCATACTCATGGAAATGTTGTACTGCCTCCGAATTCATATGCAGTAGAAGATAGTGTTGATTCATCTGGACCACTTTACTTGGAGTTTTATTCATCAGAAGGAAAGGCCAATGCTAATGACAAGGCTCTAATTTTAAGATCTCAGGAAGCTACAAGGGAAAGCCAAGAGGAGACTGAAGAACTAGTGAGAAGCCTAAATGAAGAATTGGAAATGATCAAAAAAAAGAATATTTCACTTCAATCAGAGCGTGACAAATGGGAAAAGCAAGCAAGGTATGCTGTAGACACACTCTACAGTTTAAGGAAAGAAAATGAACATCAGATGTTTGTTTTGAAACATGAAAATGAATTGATATCGAATGCCGAGGATCAATCTCGTAAAATGCTTCATAGTTTATCTCAGAGGCTACACAACTTGCAGATTGAAATGGAAGCTAGATATACTGAGAGTAAAAGAAAAGATGAATATATACATATACTACAGAATGAATGTGTTAAGGCTAAGACAGAGCTTCAAGAACAGAAGAAGTGTGTTCAAAGGCTTACTATGGAGCTTGATGAAGTGACTCAACTTCCTATTCGAATAGTTGAAGCGACAAGACAAAAGTTTGATGTTAATGCTCTTAGTTCTATTTCAGCTGCTGAATTCAGAACTCCTTATACCACTGAGGTTAAACTCGATCATCCTCAGAGCAATATCACAAAACTGGATGATAAGGAATTCCAGACGGTCAAAAGTCTGAGCAGAAATCCAACCTATACACGACAGGCTTGTGCAGTTTGCCTAACAAATGAGAAGGACATGGCCTTCGGTTGTGGGCACATGACATGCAGAGATTGTGGATCGAAAATTCGCAAGTGTCATATATGTCGAAAGAAGATCTCCAACCGTATTAAGCTATTTACTGGCTGA 1605 0.3994 MPSYGELLDQNCFLKFILMMILPFLVLLIWAEKKVANSNKGEELVGTSSSEIEQLFEEDSELMRHGGLRAYCACSFCGKLSHVTITCSRCKAALYCSKACHVTHWTFWHKYECVGSEADEGHEGSSPSHGTHFLLLDSKKEREEGEEAYIKAKEGEEEYTDGTPKSQLAIVSGHDRCAVCGNPSTKKCSRCKAIKYCSKTCQHFDWRSGHNFRCVVEKENSAQALTDHQEVHTHGNVVLPPNSYAVEDSVDSSGPLYLEFYSSEGKANANDKALILRSQEATRESQEETEELVRSLNEELEMIKKKNISLQSERDKWEKQARYAVDTLYSLRKENEHQMFVLKHENELISNAEDQSRKMLHSLSQRLHNLQIEMEARYTESKRKDEYIHILQNECVKAKTELQEQKKCVQRLTMELDEVTQLPIRIVEATRQKFDVNALSSISAAEFRTPYTTEVKLDHPQSNITKLDDKEFQTVKSLSRNPTYTRQACAVCLTNEKDMAFGCGHMTCRDCGSKIRKCHICRKKISNRIKLFTG* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1366 534 Gene3D - 67 118 - -
Aev08g1366 534 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 464 533 IPR013083 -
Aev08g1366 534 Coils Coil 402 422 - -
Aev08g1366 534 Pfam MYND finger 177 214 IPR002893 -
Aev08g1366 534 Pfam MYND finger 74 113 IPR002893 -
Aev08g1366 534 Coils Coil 278 320 - -
Aev08g1366 534 PANTHER PROTEIN, PUTATIVE-RELATED 97 532 - -
Aev08g1366 534 Gene3D - 164 220 - -
Aev08g1366 534 ProSiteProfiles Zinc finger RING-type profile. 489 522 IPR001841 -
Aev08g1366 534 PANTHER COPINE FAMILY PROTEIN 1 97 532 - -
Aev08g1366 534 SUPERFAMILY HIT/MYND zinc finger-like 173 217 - -
Aev08g1366 534 ProSiteProfiles Zinc finger MYND-type profile. 74 113 IPR002893 -
Aev08g1366 534 ProSiteProfiles Zinc finger MYND-type profile. 177 214 IPR002893 -
Aev08g1366 534 SUPERFAMILY HIT/MYND zinc finger-like 71 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1366 Aev-Chr8 8958279 8967800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1366 169 214 Miscellaneous Gene Families AT4G31670 52.727 1.04e-10 62.4