Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1365 ATGCTTGTTAATTGGGCATCATATTTGGACCCAAATTGGGTTCTTCTTTGGTTATTTGAATTGGGAGAAAAGAGAGCACTAACCATTTCTGATCATAGAAATACTGAGAAATGGCTTATTTTGCTGTTAGTCATTTTCGCAATCATGATCGTCCTTGGGCTGCACTTGAATCAGTTAGCAGTAAACAAAGAATCGAATTCGAATGCTAGTGCTGCTGAACTAGACCAATATTTCTTTGGAGGTGACGACATCCATTTTCGCCTGACCAATGATGATTGCTCAGTAGAATGCCAAATTAGACATTGGAGATCAGGGCATAACCATGAATGCCCTGAAACAGACACTTCTTCAGCAGATCAAGCAAGGGATATTGATGTTCATGAAGCCTATTTGTTTGTTAACAAGTCTGGAAAGGAGAGTACTTGTAATGGGTCCAATGGAGAAGGAATTACGCAAAGTTCTATTGTAAACGTCGATTGTTCCATTGGCAGTGATATAACCAGTTTCCATGCTTGTCAAGTGTGTGGTAGGCCAAGTACCACAAGATGTTCAAGATGCAAAATCATCAAATACTGCTCAGTAAAGTGCTTAATTCTGGACTGGAAATGGCATAAACCTCACTGTGTTGCCAGTGACGTGATTTCGTTTTCAGCCGAAAGGCCTCGCAGAGATGACCTTACCAAGGAAACAAAGGAGAACAGAACTAAATCGGTAAGATACCTAGAGGACGAAGTAACAACGTCTAGGAATGAGAGTCTATTACTAGAACTAGAGCGTGACAAGTGGATGATGCGGGCGAATTTTGCCAGAGAAAGATTTCGTAGTCTTCGGAAGGAGTCTGAGCGCCAGTTGTTTGTGTTGAAGAATGAAAAGGAATCAATATCAATTGCTGATAGGCAAGCACAAAATGTGATTCGTAATTTAAATGAGAGGCTACACCATCTTCAGATTGCATTGCAAGAAAGCATTACAGAAAAGAAAAAGCTAAGAGAACAAATGCAAATGGTAGAGAGTGAATTAAATGAGGCAAGGAAAGATCTAAAGGAAGAGCAAAAACGCTATCGATATCTTAAAATTGAGTATGATAAGAGTCATGAGACTGCAGAAAATGCCATAAAAGATGTTCAACGAGTAAAGCAAGAGCTTCAAGTGCAGTGTGAACAAATCCAGCTACTTAAAGAGAAATTTCTTAGAGAAGTCACATCTGCTGCATCTAGAGCTTCTTTTGCTGAGGCAAAGCTTAGTGATCTTCATAAAAAAATTAAATCGACAGATAATAAGATATGTGCTATATGCCTTACAAATGAAAAGGACTTGGCCTTTGGATGTGGGCACATGACTTGCGTTGATTGTGGATCAAAATTATCAAAATGTCCTATATGCCGTGAGCATATCACAAGCCATATCAAGTTGTTTCCTGGGTGA 1425 0.3937 MLVNWASYLDPNWVLLWLFELGEKRALTISDHRNTEKWLILLLVIFAIMIVLGLHLNQLAVNKESNSNASAAELDQYFFGGDDIHFRLTNDDCSVECQIRHWRSGHNHECPETDTSSADQARDIDVHEAYLFVNKSGKESTCNGSNGEGITQSSIVNVDCSIGSDITSFHACQVCGRPSTTRCSRCKIIKYCSVKCLILDWKWHKPHCVASDVISFSAERPRRDDLTKETKENRTKSVRYLEDEVTTSRNESLLLELERDKWMMRANFARERFRSLRKESERQLFVLKNEKESISIADRQAQNVIRNLNERLHHLQIALQESITEKKKLREQMQMVESELNEARKDLKEEQKRYRYLKIEYDKSHETAENAIKDVQRVKQELQVQCEQIQLLKEKFLREVTSAASRASFAEAKLSDLHKKIKSTDNKICAICLTNEKDLAFGCGHMTCVDCGSKLSKCPICREHITSHIKLFPG* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1365 474 ProSiteProfiles Zinc finger RING-type profile. 429 462 IPR001841 -
Aev08g1365 474 Coils Coil 365 399 - -
Aev08g1365 474 Pfam MYND finger 172 208 IPR002893 -
Aev08g1365 474 ProSitePatterns Zinc finger C2H2 type domain signature. 448 468 IPR013087 -
Aev08g1365 474 ProSiteProfiles Zinc finger MYND-type profile. 172 208 IPR002893 -
Aev08g1365 474 SUPERFAMILY RING/U-box 419 468 - -
Aev08g1365 474 Gene3D - 163 212 - -
Aev08g1365 474 SMART ring_2 429 461 IPR001841 -
Aev08g1365 474 SUPERFAMILY HIT/MYND zinc finger-like 168 209 - -
Aev08g1365 474 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 406 472 IPR013083 -
Aev08g1365 474 Pfam Zinc finger, C3HC4 type (RING finger) 426 467 - -
Aev08g1365 474 PANTHER COPINE FAMILY PROTEIN 1 91 472 - -
Aev08g1365 474 PANTHER PROTEIN, PUTATIVE-RELATED 91 472 - -
Aev08g1365 474 Coils Coil 305 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1365 Aev-Chr8 8945855 8954187 Tandem